Protein

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Genbank accession
AUV61904.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MAEYGLEIKNVANVVQIDGNFNNLAFRSKGTAVLGEASGSTGMRYARITTGASPTSMVAVKTNGYTYLANVIDNGNGTRTYVWIVDPGTTVTYYIFDEIEYCPPRTDKYGLIVKNKVTGKVAFDSRYKYMRVVQMLTINDFPAAWPGQSTYPMSTPNPGFVQGVTGYYLQAVPEGDPTDPGNMAWGSIYGRVCVKSSGATAYLQTTLMDQAHYPPGFPMPPQATYRYTTHMVLDLTGM
Physico‐chemical
properties
protein length:238 AA
molecular weight: 26083,31170 Da
isoelectric point:7,67249
aromaticity:0,12185
hydropathy:-0,22395

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUV61904.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,1260
Central domain 74 227 155 0,0263
C-terminal 228 238 10 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-227
C-terminal
228-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Littlefix
[NCBI] 		2079289 Uroviricota > Caudoviricetes > Schitoviridae > Littlefixvirus littlefix >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUV61904.1 [NCBI]
Genbank nucleotide accession
MG775260 [NCBI]
CDS location
range 68932 -> 69648
strand -
CDS
ATGGCTGAGTATGGATTAGAGATTAAGAACGTAGCGAACGTCGTTCAAATTGATGGTAATTTCAATAATCTAGCATTTCGTTCGAAAGGTACTGCCGTTCTTGGCGAAGCGTCTGGTTCTACTGGTATGCGTTATGCCCGTATTACTACTGGTGCTTCGCCTACCTCTATGGTTGCCGTTAAAACTAATGGGTATACCTACCTTGCCAACGTCATAGACAACGGTAACGGTACTCGTACCTATGTCTGGATTGTTGACCCAGGGACTACTGTCACCTACTACATCTTTGATGAAATTGAGTACTGCCCGCCCCGTACTGATAAGTACGGATTAATTGTGAAAAACAAGGTGACAGGTAAAGTCGCATTTGATTCGCGATATAAGTACATGCGTGTCGTACAAATGTTGACTATTAATGACTTTCCGGCTGCTTGGCCTGGGCAGTCTACCTACCCTATGTCTACTCCTAACCCTGGTTTTGTTCAGGGTGTTACAGGTTACTACCTTCAGGCTGTGCCAGAAGGCGACCCTACTGATCCAGGTAACATGGCTTGGGGTAGCATTTATGGTCGTGTTTGTGTCAAGAGTTCAGGTGCTACTGCTTACCTACAAACTACGCTTATGGATCAAGCTCATTACCCTCCGGGTTTCCCTATGCCACCACAAGCGACGTATCGGTATACAACTCATATGGTTTTAGACTTGACAGGCATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f1feba2ddd5e3c6413e83a9ce40f99b8ac05507b5aeffef5ea724d47d0d1790
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudomonas phages infecting Pseudomonas sp. isolated from Prunus avium Colberg,O., Carstens,A.B., Kot,W. and Hansen,L.H. 2013-08 — GenBank