Protein

View in Explore
Genbank accession
ASH99372.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVATGADIDYATNAVTGQTQKTLPAVLRYAGFSPVSWDFSTGGTLTVNGRDKVVYDPVSKTWYSYAGALPVTVPAGFNPVGNADWKPQTDPDLRNELTSTSGASLVGGSVYVVDTFESAKLVENVNSKTLRTLGHHTEGKGPAEYVKTGTTGTPSSGTEALFYDATGHGWRLKTDSVDYYMFGAELDGATDDTLPVVAAHTYANANKIPIVQNGGNAFVTPNDSSRQIVFNTDAAFTGGFKFSSNSITGRGFVVRSVADEITLSQSDVVISEFVATRMKIPSLSGYANCYAAIQSTETDLNRKRDTGPALQLKRQPVVIGKDGTLDAPLWTTFSSISAIKIQSILLPTITIDGFRLRSEGALTNANPFGVQRNNVVIKNFYYEKGTTSATIPVQSLLSVEFCYNVTIEGISCDPLSVGIVDYNYVINTWTSSKISIRNMTSFDGWAQLDGNYCRNVSISDSIIDRVGSHFRCYDYTFKNLTARRGRCIAVSGGGLLHVENIKVYAESSTVSDEQYTVVALRGDYGAEWDGAVVVKNVIFDFSNFYSSSTGITASIVSAFIDSTVGAHDFMRTVVMPKSISIKDCTFIINTMPGSYLRALGVGCTSAIVSSVIYPSNIDIENITCDNSSGTNKFKVRGVEWNTLQRSEIRRHDVNIRVKGVVNIDPATYGETILDDANSTNTILTTGTNTRIYMTVRDCPWQSLRAEGNYIRTKVYGGSITYFTGTAGTSNRISFYGTEFNGTRFRGAIKVTIQDCIFNNYVDYTSASVPIGNGQSVDTNTTFIIGTATEFGATITGTVVTASTAKTGYSQSGYFQ
Physico‐chemical
properties
protein length:848 AA
molecular weight: 91426,13200 Da
isoelectric point:5,84012
aromaticity:0,09906
hydropathy:-0,11521

Domains

Domains [InterPro]
DC_0018
ATT
1–275
DC_0018 IPR011050 DC_0867
G3DSA:2.10.10.80
ATT
65–133
G3DSA:2.10.10.80 IPR011050
ASH99372.1
1 848
Architecture
ATT
STR
RBD
ATT 1-275 | STR 357-578 | RBD 624-848
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASH99372.1
1 848
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,9900
Central domain 225 835 612 0,9874
C-terminal 836 848 12 0,6899
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-835
C-terminal
836-848

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ST20
[NCBI] 		2569975 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASH99372.1 [NCBI]
Genbank nucleotide accession
MF153391.1 [NCBI]
CDS location
range 19675 -> 22221
strand -
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAGAAGCACCAGATTTTCGAAGCCGAGGTTATCACCGGTAAATCCGGCGGGGTGGCTACTGGCGCTGATATTGATTACGCGACCAATGCTGTTACGGGTCAGACGCAGAAGACGCTCCCGGCGGTACTGCGCTATGCTGGGTTTTCTCCAGTATCGTGGGATTTCTCCACGGGCGGTACGTTGACAGTTAATGGCCGCGACAAAGTGGTGTATGACCCTGTAAGTAAAACGTGGTACTCGTATGCGGGTGCACTTCCTGTTACAGTTCCAGCCGGTTTTAACCCTGTGGGAAACGCTGACTGGAAACCGCAAACTGACCCCGATTTACGCAACGAGCTAACATCCACATCTGGTGCGTCGTTAGTAGGAGGGTCTGTATATGTCGTAGATACTTTTGAGTCGGCTAAACTTGTAGAAAACGTTAACTCTAAAACATTACGCACTTTAGGACACCACACAGAAGGTAAAGGCCCGGCGGAGTACGTTAAGACCGGAACTACAGGCACTCCGTCTAGCGGAACAGAAGCTTTATTTTACGATGCGACAGGTCACGGGTGGCGTCTAAAAACAGACAGTGTTGATTATTACATGTTTGGTGCGGAGCTTGACGGGGCAACAGACGATACATTACCGGTGGTAGCGGCGCACACCTACGCTAACGCTAATAAAATTCCTATTGTGCAAAATGGTGGTAATGCTTTCGTCACCCCAAACGACTCCTCCCGGCAGATTGTATTTAACACTGATGCCGCGTTTACCGGTGGGTTTAAGTTCAGTTCAAATTCAATCACTGGCCGTGGGTTTGTCGTACGCTCTGTTGCTGATGAGATAACCCTCTCACAGAGTGATGTTGTTATTTCTGAGTTCGTAGCAACACGGATGAAGATTCCAAGTCTGTCCGGTTACGCAAACTGTTACGCAGCTATTCAGTCTACGGAAACCGACCTAAATCGTAAACGTGATACTGGCCCTGCGTTGCAACTTAAACGTCAACCGGTAGTAATTGGCAAGGACGGAACTCTTGACGCGCCACTGTGGACGACTTTCAGCTCAATATCTGCGATTAAAATTCAAAGTATCCTTCTACCGACTATAACCATTGATGGTTTCCGGTTGCGGTCTGAGGGTGCGTTAACCAATGCCAACCCCTTCGGCGTTCAAAGGAACAACGTTGTCATAAAAAATTTCTACTATGAGAAAGGCACGACATCAGCAACAATACCGGTTCAATCCCTACTCAGCGTAGAATTTTGTTATAACGTAACTATAGAGGGTATCTCATGTGACCCGTTGAGTGTAGGTATCGTTGATTACAACTACGTTATAAACACATGGACAAGTTCTAAAATTTCCATCAGAAATATGACATCTTTTGATGGTTGGGCGCAGCTTGACGGCAACTATTGCCGAAATGTTTCTATTAGTGATTCCATAATCGACCGTGTAGGCTCTCACTTTAGGTGCTACGACTACACTTTCAAAAACCTCACGGCACGAAGGGGGCGCTGCATCGCTGTTTCCGGAGGAGGATTACTCCATGTGGAAAACATCAAGGTTTATGCGGAATCATCCACGGTATCCGATGAACAGTACACTGTCGTAGCCCTTCGAGGTGACTACGGTGCTGAGTGGGACGGAGCCGTCGTAGTTAAGAATGTTATTTTCGACTTCAGTAACTTCTACTCATCGTCTACTGGCATAACGGCATCTATAGTGTCGGCATTTATCGATTCCACCGTGGGTGCACACGATTTTATGCGTACAGTCGTTATGCCCAAGAGCATATCTATTAAAGATTGCACTTTCATCATAAACACCATGCCTGGAAGTTATCTGCGTGCATTAGGGGTTGGTTGTACCTCTGCAATAGTCTCTAGTGTTATTTACCCAAGTAATATAGATATAGAAAACATAACGTGTGATAACAGTTCTGGTACAAATAAATTTAAGGTCCGCGGGGTGGAATGGAACACTTTACAGCGTTCTGAGATACGGCGACATGACGTGAACATCCGCGTGAAAGGTGTTGTAAATATAGACCCGGCGACATACGGAGAGACCATACTTGATGACGCTAACAGCACAAATACCATCCTTACTACCGGAACAAACACCAGAATCTATATGACTGTTCGTGACTGCCCGTGGCAGAGCTTGCGTGCGGAAGGTAACTATATACGCACAAAAGTTTATGGAGGGAGCATTACTTACTTCACAGGCACGGCGGGTACATCAAACCGTATATCTTTTTATGGAACTGAGTTCAACGGAACAAGATTTCGCGGTGCGATAAAGGTTACTATCCAGGACTGTATTTTCAACAATTATGTTGATTACACATCCGCATCTGTTCCCATAGGGAACGGGCAGAGTGTTGATACCAACACGACTTTTATCATCGGAACTGCTACAGAGTTTGGAGCTACCATAACTGGCACTGTTGTTACGGCTTCAACAGCAAAAACTGGATACTCGCAATCTGGGTATTTCCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a34cd4ef897bf204024455b79c40c8559bd9837fa1f639aa182a08559d2dee43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7413
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of phage ST20 Liu,X., Liu,H. and Li,J. 2019-09-18 — GenBank