Protein

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Genbank accession
YP_009325016.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,54
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAYDNRGNSALRPFKTLQRAFLEVARFSYRVGLSNDEFDAFSIYLYPSDYVLDNRPGVADYNDVQPFDANTNFDLTSSSNVLYRFNSTRGGIIVPRGASVVGSDLRRTKFIPKYVPYPTVQGSLGITATNEPTASAIFNLTGGCYFWQASFFDGDTNGVYYRGDDIATIAPNFSHHKLTCFEFANVQDLNLYYQKISKAYATIPDSSGVVAQDQLQARIEENRIVGPISDEFAISQIIRNGQTATAFTVDELGNPKNHGFSVGVAVNISGVNGPTEQDKLLYNGSFLVTSAQGNQFTYQMSAEPSGNAIGSNILVKVEIDTVDSASPYVFNMSLRSVWGINGMHADGSRATGFKSMVVAQFTGISLQKDDRAFVVYNPSSGNYEPQAAGSGAHINGLAEYRKGWRHAHIKASNDAFIQVVSVFAVGFGDHFFADSGGDLSITNSNSNFGNTSLRSKGFKGTAFTKDKAGQITHIIPPKSLDDVDEISINWVTIDINATRAEADNTRLYLYGYTSELGRPPSKIQGYTIGARRDDVNTPDRIYVALVASGASEPTTHYADISPSGPDVTGTRAGDDESPIKYDTNRGQWFLQVDNANNTIYTTLQANSIYQNLGFTPTTFIRRVPDARDLNDRTYRFRYVLDKDAFPIPRPPITGFVLQPRSSETNSPAYSKTYYVYDVETFQEFVIGETDGIYYLTVLSASVSPITSNFDDFFFSQQTVDIYPAFDRDNPVADPAASVSIADNEVLGLVRTTDGASPTPNEDTQLSITKETAQFFLQELENNLGYTTTTNTLSNIVVTARLGDEEERMIPLQLNPDNSVAPLSIELRRYSILRASGHTFEYLGFGPGNYSTAFPSTQVEVLSPSQVRLSQSLKEAAGVAYYSGVNSDGELFVGNQVINPVTGQITNEDIAQLNVLGEEGTTIETFSELVLTDKLTVIGGASNQLESVFSGPVTFQKKVTSGNQIQSLNFTYSNDDGTVLRQTFLAEELAGLPDLDSGLAFNSGDICYNIDWVPGQSLGWIYDAGTWYKFGLSDTTPITSNRFSGVTNYGIGMAPDAANRLKISGNTYFDGDIDVTGKYGCSDKYSLATGIANGNAGVTYNGDGVSQSFNISPGHTAYSVLVFLNGVAQIPGVDYTVTGNAVDFSIATPPATGDTIHIRELVI
Physico‐chemical
properties
protein length:1190 AA
molecular weight: 129533,64830 Da
isoelectric point:4,66361
aromaticity:0,10924
hydropathy:-0,25160

Domains

Domains [InterPro]
DC_0066
STR
1–1189
DC_0066
IPR023366
STR
266–343
IPR023366
YP_009325016.1
1 1190
Architecture
STR
STR 1-1189 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009325016.1
1 1190
Domain Start End Length (AA) Confidence
N-terminal 1 127 127 0,8242
Central domain 128 335 209 0,6587
C-terminal 336 1190 854 0,0366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-127
Central
128-335
C-terminal
336-1190

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-WAM1
[NCBI] 		1815521 Uroviricota > Caudoviricetes > Pantevenvirales > Sokavirus > Sokavirus swam1
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009325016.1 [NCBI]
Genbank nucleotide accession
NC_031944.1 [NCBI]
CDS location
range 23364 -> 26936
strand +
CDS
ATGGCACTTACTCGTCTTAAAAATATCATTACGTCCCGTACGGGACGTATTATCTACGTCAACCCAGACGACTTCGATGCATCGGACGCATATGATAACCGAGGTAACTCGGCATTGCGTCCGTTTAAGACGTTGCAACGTGCCTTTCTTGAAGTGGCACGTTTCTCATATCGTGTTGGTCTGAGTAATGACGAATTTGACGCATTCTCGATCTATCTGTATCCTTCTGACTACGTTCTGGATAACAGACCTGGGGTAGCAGACTATAACGATGTGCAACCGTTTGACGCTAACACTAATTTTGACCTGACCAGTAGTAGTAATGTTCTTTATAGGTTTAATTCAACTCGCGGTGGTATTATTGTCCCTCGTGGTGCTTCTGTTGTTGGTTCGGACCTACGTCGAACCAAGTTCATTCCAAAATATGTCCCGTATCCCACAGTACAGGGTAGTCTCGGTATTACTGCTACTAATGAACCTACTGCTTCTGCGATCTTTAACCTAACTGGTGGTTGCTACTTCTGGCAGGCATCATTCTTTGATGGTGATACCAATGGTGTCTACTATCGTGGTGATGATATTGCAACTATTGCTCCAAACTTCTCTCACCACAAACTCACTTGCTTTGAGTTTGCTAACGTACAAGATCTGAACCTGTACTATCAGAAGATCTCGAAAGCATACGCTACGATTCCTGACTCCTCTGGTGTGGTTGCACAGGACCAGTTGCAGGCAAGAATCGAAGAAAACAGAATTGTGGGTCCGATTTCGGACGAATTTGCCATCTCGCAGATTATCAGAAATGGACAAACTGCTACGGCGTTTACTGTTGACGAACTCGGTAATCCGAAGAATCATGGATTCTCCGTGGGTGTCGCTGTTAATATTTCTGGCGTTAATGGTCCTACTGAGCAGGATAAACTCCTCTATAATGGATCGTTCCTGGTAACATCTGCCCAAGGTAATCAGTTCACCTATCAGATGTCGGCAGAACCGTCAGGTAATGCTATCGGTTCCAACATCCTGGTGAAAGTTGAGATTGACACAGTTGACTCTGCGTCACCATATGTGTTCAACATGTCCCTACGTTCTGTGTGGGGTATCAATGGTATGCACGCTGATGGTTCGCGTGCTACTGGTTTCAAATCGATGGTGGTTGCACAGTTCACGGGTATCTCTCTGCAAAAAGATGACCGTGCGTTTGTAGTCTATAACCCATCGTCGGGCAACTATGAACCACAAGCAGCAGGTTCTGGTGCTCACATCAACGGTCTTGCAGAGTATCGTAAGGGGTGGAGACATGCTCACATTAAAGCAAGTAATGATGCGTTTATTCAGGTGGTGTCCGTCTTCGCTGTGGGATTCGGTGATCACTTCTTCGCTGATAGTGGTGGTGACCTCTCTATTACTAACTCGAACTCCAATTTCGGTAATACATCACTGAGATCGAAAGGATTCAAGGGCACTGCTTTCACCAAGGATAAGGCAGGTCAGATTACACATATCATCCCACCCAAGTCTTTGGATGATGTTGATGAGATCTCGATCAACTGGGTGACTATTGATATTAACGCAACTCGTGCAGAGGCAGACAATACTCGTCTGTATCTGTATGGATATACTTCCGAACTGGGTAGACCACCCAGCAAGATTCAGGGTTACACTATTGGCGCAAGACGCGATGATGTCAATACTCCCGATAGAATCTATGTTGCACTTGTCGCGTCTGGCGCGTCTGAACCCACTACACACTATGCTGACATTTCACCTTCTGGTCCTGATGTAACTGGCACAAGAGCAGGTGATGATGAGAGTCCGATCAAATATGACACCAACCGTGGTCAGTGGTTCTTGCAAGTAGATAACGCTAACAATACTATCTACACTACACTGCAAGCGAACTCTATCTATCAGAATCTTGGATTCACGCCGACAACATTCATTCGTCGTGTGCCTGATGCTCGTGACCTGAATGACAGAACCTATCGTTTCCGTTATGTTCTGGATAAGGATGCGTTCCCGATTCCTCGTCCTCCGATTACTGGTTTCGTTCTGCAACCCAGATCATCTGAGACTAACTCACCTGCTTACTCTAAGACTTACTACGTCTATGACGTAGAGACATTCCAAGAGTTTGTGATTGGTGAAACTGATGGTATTTACTACCTGACAGTTCTGTCTGCGTCAGTATCTCCCATCACATCAAACTTTGATGATTTCTTCTTCTCTCAACAGACAGTAGACATTTATCCTGCATTCGACAGAGACAATCCTGTCGCTGACCCTGCTGCATCTGTGTCTATCGCAGACAATGAAGTTCTGGGTCTGGTTAGAACTACTGATGGTGCAAGTCCTACTCCTAATGAAGACACTCAGTTGTCTATTACTAAGGAGACCGCACAGTTCTTCCTGCAAGAGTTGGAGAACAATCTTGGATATACCACCACAACCAATACTCTGTCTAACATTGTTGTGACAGCACGTTTGGGTGATGAAGAGGAGAGAATGATTCCGTTGCAGTTAAATCCTGACAACTCTGTTGCTCCTCTGAGTATTGAACTTCGTCGTTATTCGATTCTTCGTGCATCTGGTCACACGTTTGAGTATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCATTCCCATCTACCCAGGTTGAGGTTCTCTCACCCTCGCAGGTTAGATTGTCTCAGTCACTCAAAGAAGCAGCAGGTGTTGCATACTACTCTGGTGTGAACTCTGATGGTGAACTGTTCGTTGGTAACCAGGTCATCAACCCTGTTACAGGTCAGATCACTAACGAAGATATTGCACAGTTGAACGTTCTTGGTGAAGAGGGTACAACGATTGAGACATTCTCTGAACTGGTGCTTACCGACAAACTAACTGTTATCGGTGGTGCATCTAACCAGTTGGAATCTGTATTCTCTGGTCCTGTGACTTTCCAGAAGAAGGTTACATCTGGTAATCAGATTCAGTCTCTGAACTTTACCTATTCTAACGATGATGGTACTGTGTTGAGACAAACATTCCTTGCTGAGGAACTTGCTGGTCTGCCTGATCTTGATTCTGGTCTTGCATTTAACAGTGGAGACATCTGTTACAACATTGATTGGGTTCCTGGTCAATCTCTTGGTTGGATCTATGATGCTGGCACCTGGTATAAGTTTGGTCTGAGTGATACTACTCCGATCACATCTAATAGATTCAGTGGTGTTACTAACTACGGTATTGGTATGGCACCTGATGCCGCTAATCGATTGAAGATTAGTGGTAACACATACTTTGATGGTGACATCGATGTTACGGGCAAGTATGGTTGCTCTGATAAATACTCATTAGCAACTGGTATTGCAAATGGCAATGCAGGTGTAACATATAATGGAGATGGTGTATCTCAATCATTCAACATCTCTCCTGGACACACAGCATATTCGGTATTGGTATTCCTTAATGGTGTTGCACAAATCCCTGGTGTAGACTACACAGTCACAGGTAATGCTGTTGACTTCTCTATCGCTACACCTCCTGCAACTGGTGACACTATCCATATTCGTGAACTTGTTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
76f1982e47ece22978f93c98802d10f69f9eb93dd37f29375e582038ea6bcd48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50