Protein

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Genbank accession
XPP56720.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNILDSAKQYLSNTENLKLAHLVSLELPGEEGVFVYFTDYFRSITFNGQKYETGVVKRIGDVKQTKDFTIYRVPVQVSGAIEEEINRVLNSKSFLNRKIKILRVFLDDDGEVIPIYSNGDTITYFEGIIVTSKLDETNTNSGTGRSTITWNCANKNYELDAVNGRITDDESHRGLINVGGTMQPSGSAKKPEYQLDRGFFHAGKSVKLLAEYQTKEKRFRLKKRRAGGFRGLMGQKHYDMEEYWADVVREVDMDINLTAKYLPVLYGVQKVSGIPIFFDTDIGNPEEVWAVYAFCEGEIDGFLDISFGDNPMICVSENDQEKRACVGMKRNNGDTIGALAPKSGRTAPSKHGEHYIYNDGDGPIEFWTFHGSSTQDAAKILVDKAAASEFKLQSDGNYGSEYWDDTFKLLDTAYVVVKYTLNENRTSIPEVSAEIQGKKIPVYHEDGTSTSDKTSLNLAWQTLDYLRSTTYGAGLTLDEIDLPAVQECAKIMDDIDNSYEPDWVPYWRYLGWEDYKAENRQILQGSGLLSTSDTVVKNIQALIGQFDASLNIVSGKYTLTMEANRPTIYDIDEGDIINGSIQVADNSMDQKYNAVQASIIDPAKGWGTNTITFFNKNYKLEDNGKDRKANISFPFITNYYTARTRAEYYLRRSRYNRTVSFELPFTFMWLYPNANITLTKKRYNWDKKTFMIQDMTWMANGHIRVVAREYDETMFLSSGQVDNSNNQIPDVVVNVLPPRDLKYAPKAGDPKVGLNGTLSWLPSLSKRVSYYTIKYTGLTDLITIPAPGNIAPSQRMELPLYNLAEGEYTFEVRAVSFDGETSMPVSITEKINPSAILPMIENFIIVNRAVVSGNVFVGKDLQLAWDELIEGRSVDGFKYHLRFISGDTGDTLRDITTTGTTFTYTLAMNKEDYKLLHGTLGIHRNMTVYIRGEGSNNITSINWTVL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106888,02540 Da
isoelectric point:5,24325
aromaticity:0,10982
hydropathy:-0,41225

Domains

Domains [InterPro]
DC_0187
STR
242–942
DC_0187
IPR032876
ATT
538–693
IPR032876
XPP56720.1
1 947
Architecture
STR
ATT
STR
STR 242-537 | ATT 538-693 | STR 694-942 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP56720.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 307 307 0,8977
Central domain 308 522 216 0,5742
C-terminal 523 947 424 0,0480
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-307
Central
308-522
C-terminal
523-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Hades
[NCBI] 		3388591 Viruses >
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP56720.1 [NCBI]
Genbank nucleotide accession
PQ768827.1 [NCBI]
CDS location
range 25165 -> 28008
strand +
CDS
ATGAGTAACATACTAGATTCAGCAAAACAATATCTAAGTAATACAGAAAACCTTAAATTAGCTCATCTAGTTTCTTTGGAGTTACCTGGTGAGGAGGGTGTTTTTGTATACTTTACTGACTACTTTAGAAGTATCACTTTCAATGGTCAGAAATACGAAACTGGCGTGGTTAAACGTATAGGTGATGTAAAACAAACAAAAGATTTCACTATCTACAGAGTACCTGTACAGGTTAGTGGAGCAATAGAAGAAGAAATAAATAGAGTACTTAATTCTAAAAGTTTCTTAAATAGAAAGATAAAGATTCTTAGGGTTTTCCTAGATGATGACGGTGAGGTGATTCCTATCTATTCTAATGGAGATACGATTACATACTTCGAAGGTATTATAGTAACAAGCAAGTTAGATGAGACTAATACTAACTCCGGCACAGGACGTTCTACTATTACATGGAACTGTGCTAATAAGAACTATGAGCTAGACGCTGTAAATGGTCGTATAACGGATGATGAGTCTCATCGTGGCCTTATCAATGTAGGCGGTACCATGCAACCTTCTGGCTCTGCTAAAAAACCAGAATATCAATTAGATCGTGGCTTCTTCCATGCAGGTAAGTCTGTAAAACTACTTGCTGAATACCAGACAAAGGAAAAACGTTTCAGATTGAAAAAACGTAGAGCAGGTGGATTCAGGGGGTTGATGGGTCAGAAGCACTACGACATGGAAGAATACTGGGCAGATGTTGTAAGGGAAGTAGATATGGATATAAACCTTACAGCAAAATACTTGCCAGTACTTTATGGGGTACAGAAAGTATCCGGTATTCCTATCTTCTTTGATACAGATATTGGTAATCCTGAGGAAGTGTGGGCTGTATATGCTTTCTGTGAAGGAGAAATTGATGGTTTTCTCGATATATCCTTTGGTGACAACCCTATGATCTGTGTATCAGAGAATGATCAGGAGAAGCGCGCTTGTGTTGGTATGAAAAGAAATAATGGGGATACTATAGGAGCACTAGCACCTAAAAGTGGAAGAACAGCCCCAAGTAAGCACGGAGAACATTATATCTATAATGATGGTGATGGCCCTATAGAGTTCTGGACGTTCCACGGATCAAGTACACAGGACGCTGCCAAGATTCTTGTTGATAAAGCAGCTGCGAGTGAATTTAAGCTACAGAGTGATGGTAACTATGGTTCAGAATATTGGGACGATACCTTCAAGTTATTAGACACAGCATATGTTGTTGTTAAGTATACTCTTAATGAAAACAGAACAAGTATTCCAGAAGTTTCCGCAGAAATACAAGGTAAGAAAATCCCAGTATACCATGAAGACGGAACCTCTACTAGCGATAAGACTTCACTTAACCTAGCATGGCAGACACTAGATTATCTAAGAAGTACTACTTATGGGGCAGGTCTTACTCTAGATGAGATAGATTTACCAGCCGTTCAAGAGTGCGCTAAGATAATGGATGACATTGACAACTCTTATGAGCCTGATTGGGTTCCTTACTGGAGATACTTAGGCTGGGAAGACTACAAAGCAGAGAATAGACAAATATTACAGGGTTCTGGGTTACTATCTACTAGCGACACTGTTGTTAAGAATATACAGGCTTTAATAGGGCAGTTTGATGCTTCATTGAATATAGTTAGTGGTAAATATACTCTTACCATGGAAGCTAATCGACCTACTATCTATGATATAGATGAAGGTGATATCATAAATGGAAGTATTCAAGTAGCAGATAATTCCATGGATCAGAAGTACAACGCGGTACAGGCTAGTATCATAGATCCAGCTAAGGGTTGGGGTACTAATACAATTACATTCTTTAATAAGAATTATAAACTAGAAGATAACGGTAAAGATAGGAAGGCTAATATATCTTTCCCATTTATTACTAACTACTATACAGCTAGAACCCGCGCAGAATACTACTTACGAAGATCTAGATATAATAGAACTGTATCTTTCGAGCTACCTTTTACCTTCATGTGGTTATACCCAAACGCCAATATAACTCTTACTAAGAAGCGTTATAATTGGGATAAGAAGACCTTCATGATACAGGATATGACATGGATGGCCAATGGCCACATAAGAGTAGTAGCCAGAGAGTACGATGAAACAATGTTCCTAAGCTCTGGGCAGGTAGATAATAGTAATAATCAGATACCTGATGTAGTTGTGAATGTACTGCCACCTAGAGATCTTAAATATGCACCTAAAGCAGGAGATCCTAAAGTTGGTCTTAATGGTACGCTATCTTGGCTGCCTAGTTTGTCTAAGAGAGTATCATACTACACTATTAAGTACACTGGGCTTACAGATCTTATCACTATCCCTGCTCCGGGTAACATAGCTCCGTCCCAAAGAATGGAGTTACCACTATATAATTTAGCAGAAGGCGAGTATACTTTCGAAGTACGCGCTGTCTCCTTCGATGGGGAGACAAGTATGCCTGTAAGTATTACAGAGAAGATAAATCCTAGTGCAATACTTCCTATGATTGAAAATTTCATTATAGTAAATAGGGCAGTAGTATCCGGAAACGTATTTGTAGGTAAAGACTTACAGCTAGCATGGGATGAGTTAATTGAAGGTAGGTCAGTGGATGGATTCAAGTACCACCTAAGATTTATCTCTGGAGATACTGGAGACACTCTCAGAGATATTACCACAACAGGTACTACTTTCACGTACACTCTAGCGATGAATAAGGAAGACTATAAACTCTTACATGGTACTCTAGGTATACACAGAAACATGACTGTGTATATCAGAGGTGAGGGTTCTAATAATATAACTTCAATTAATTGGACGGTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b14c23ccb308280072d903bb0b7b2afc003bfa525c5f46bf013a94ebe3385664
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8107
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50