Protein

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Genbank accession
CAB4218082.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MPSAALSPAPKLQFFDSNGNPLTGGKVYTYAAGTSTPLATYVDSGGVTTNTNPIILDVRGEANIWLNSAAYKFILKTADDTLIWTVDNITSTDALTAYLVGLLNAYKADLANNSDATKGDALVGFRQSNAGGNLANAVGRTVHQKFQETISVKDFGATGDGVTDDTTAIQNAVAVCSGKQLYFPSGTYLVSAIIDLVANMSIIGDIKQSILKIKTGTYSSANASIFRAANVGNIYIYGLDFNGNKGNIGTTRNPINTIYNSYSVIYDTCRWVSCEGICLNISTSPTYCQILNCIFYQCGGATNNSDGYRNQAIAFSGASTTFALGTQIRGNYFFEQGLDCISMANCNDIVVSDNIAEDSYSFLFNAPTPYRSVNITVTGNVIRNTNQGNLVNSVNPVAIDLPYVSNCTIVGNAIFKCAQSGIGIFEGSSNVVIDGNTLLDCGISPVSWTGGISIGGGLGAASGISEVVVTDNTILSTGNFPAMLFGILIGNDVEALTISENNIVNAATSKYGYYLFTVVPTVATTFALTTNANTSATTLINDFDAYTQAITNWRKANTLTGYYFNGTKVVGIQQAAIANSGNATTDAILAALRTHGLIAT
Physico‐chemical
properties
protein length:600 AA
molecular weight: 63119,97800 Da
isoelectric point:4,69185
aromaticity:0,09333
hydropathy:0,14183

Domains

Domains [InterPro]
IPR012334
101–392
IPR012334 IPR006626 IPR006626 IPR006626 IPR006626
IPR051801
146–534
IPR051801
IPR011050
147–516
IPR011050
IPR024535
150–325
IPR024535 IPR006626
IPR006626
231–252
IPR006626 IPR006626 IPR006626 IPR039448
CAB4218082.1
1 600
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4218082.1 [NCBI]
Genbank nucleotide accession
LR797471 [NCBI]
CDS location
range 5034 -> 6836
strand -
CDS
ATGCCATCTGCTGCTCTTTCACCCGCACCAAAACTTCAGTTTTTTGACAGCAATGGCAATCCTTTGACTGGAGGAAAAGTGTACACCTACGCGGCTGGCACATCTACGCCGCTGGCGACCTACGTAGATTCTGGCGGTGTGACAACCAATACCAACCCCATTATTTTGGACGTTCGCGGCGAAGCCAACATTTGGCTAAATTCTGCAGCGTACAAATTTATTCTTAAAACCGCTGATGACACGTTAATTTGGACGGTGGACAACATTACCAGCACCGATGCTTTAACAGCGTATTTGGTTGGCTTGTTGAATGCGTATAAAGCTGATCTAGCCAATAACTCAGACGCAACCAAAGGCGATGCGTTAGTGGGCTTTCGGCAGTCCAATGCAGGTGGCAATTTGGCTAACGCTGTGGGGCGCACGGTCCATCAAAAATTCCAAGAAACAATTAGCGTCAAGGATTTTGGCGCTACGGGTGACGGGGTAACCGATGACACAACTGCAATTCAAAACGCGGTAGCGGTTTGTTCTGGCAAACAGTTGTACTTTCCAAGCGGCACTTATTTGGTATCTGCCATCATTGATTTGGTGGCCAATATGAGTATCATTGGCGACATCAAACAATCTATTTTGAAGATTAAAACCGGCACATACAGCAGCGCTAACGCCAGCATATTCCGCGCAGCCAATGTGGGAAACATCTATATCTATGGTTTAGACTTTAACGGTAACAAGGGCAATATTGGCACAACACGCAACCCTATCAACACAATTTACAACTCGTACAGCGTCATTTATGACACTTGCAGGTGGGTAAGTTGCGAAGGGATTTGCCTGAACATATCCACATCGCCTACTTATTGCCAAATTCTAAATTGCATATTTTACCAATGCGGCGGCGCAACCAATAATTCTGACGGCTACCGCAACCAAGCCATTGCATTTTCAGGCGCGTCAACTACATTTGCGCTTGGTACTCAGATTCGCGGCAATTACTTTTTTGAACAAGGGTTGGATTGCATCAGCATGGCCAACTGCAACGACATCGTTGTTTCAGATAACATTGCAGAAGATTCGTATTCATTCTTGTTTAACGCCCCCACGCCATATCGGTCAGTGAATATTACTGTTACAGGTAACGTAATCCGAAACACCAACCAAGGTAATTTGGTAAATTCGGTCAACCCCGTAGCAATTGATTTGCCTTACGTTTCCAATTGCACGATTGTTGGCAACGCAATTTTCAAGTGCGCTCAATCTGGTATCGGTATTTTTGAAGGCTCTAGCAACGTAGTCATTGACGGCAACACTTTGCTTGACTGCGGAATTAGTCCGGTATCTTGGACGGGCGGCATTTCAATTGGCGGCGGTTTAGGCGCAGCGTCAGGTATTTCTGAAGTGGTTGTTACTGATAACACCATTTTGTCTACGGGCAATTTCCCTGCCATGTTGTTTGGCATTTTAATTGGCAACGACGTTGAGGCTTTGACAATTTCAGAAAATAACATTGTCAATGCAGCTACTAGCAAGTACGGTTATTACCTGTTCACCGTAGTGCCAACTGTAGCCACCACGTTTGCGTTGACAACCAATGCGAACACTTCAGCCACCACGTTGATCAATGATTTTGATGCGTATACGCAAGCGATCACCAACTGGCGCAAAGCGAACACGCTGACGGGTTACTATTTTAACGGCACAAAGGTGGTGGGTATTCAGCAGGCCGCAATTGCTAACTCGGGCAATGCGACCACGGATGCGATCCTTGCCGCCCTTCGTACACACGGTTTGATTGCGACTTAA

Tertiary structure

PDB ID
d5e85e5927b10b2ad8efbdabd529446dd6f0641faac012ce2b62b4ecb372b3fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7748
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50