Protein

View in Explore
Genbank accession
UIS24595.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQSMLITSKGSLRYTAEDERRMNAILRTLTPGDSTSTTAWKMADNSFVTLTFEELRDLMTEADSLAGPRIVSVFSRAQMLKGKLEAGERVTMRDIASEAWS
Physico‐chemical
properties
protein length:101 AA
molecular weight: 11280,75170 Da
isoelectric point:5,42326
aromaticity:0,05941
hydropathy:-0,31089

Domains

Domains [InterPro]
DC_2197
STR
5–101
DC_2197
IPR025484
STR
12–90
IPR025484
UIS24595.1
1 101
Architecture
STR
STR 5-101
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ZY21
[NCBI] 		2909584 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UIS24595.1 [NCBI]
Genbank nucleotide accession
OM140839.1 [NCBI]
CDS location
range 28798 -> 29103
strand +
CDS
ATGCAGAGTATGCTGATCACCAGCAAAGGCTCGCTTCGCTACACCGCTGAAGACGAACGCCGTATGAATGCCATTCTGCGCACGCTGACACCGGGCGATTCGACAAGCACGACAGCCTGGAAGATGGCCGACAATTCGTTCGTGACGCTGACGTTTGAAGAGCTGCGCGATCTGATGACTGAGGCTGACTCCCTCGCTGGCCCTCGCATCGTCTCAGTGTTTTCCCGAGCGCAGATGCTCAAGGGTAAGCTCGAAGCGGGCGAGCGCGTCACAATGCGCGACATTGCGTCCGAAGCGTGGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c1cca937f9a0bad495ae29a3e28c120daa021fb75b54ceef4d10d04486562fe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9185
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two nickie-like bacteriophages that infect the kiwifruit canker phytopathogen Pseudomonas syringae pv. actinidiae Zhang,H., Wu,H., Xia,H., Zhong,C., Li,L. and Zeng,C. 2022 — GenBank