Protein

View in Explore
Genbank accession
QTD79396.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDILAGALDTAQGYYDDAKNRLFGDGTTTLRFRNCGGVVLDAVTSEDHESELTIADNTLETGAKASDHAALEPKVISVTGTVVGYDNTSVQEDFISDITGLRSTDFLDNLGLPSAMSTVIDKTRDMVVNKLATFIDWGALDAAISSSLVPWLPDFSIAEELKTSDNMRIEQMYRNFLDFQKNVVFCTVDTGIFQYENMLLQSVRVRQQKDGSAEFTLRFREVIEVPITVTNAVASKSTGRPGNNGTKKSGRAASQGDATKNKNINNATSIKDKKVNDNRGVGVTLGDMLGVNLRGFFG
Physico‐chemical
properties
protein length:299 AA
molecular weight: 32460,96230 Da
isoelectric point:4,87181
aromaticity:0,07023
hydropathy:-0,26622

Domains

Domains [InterPro]
IPR048494
41–231
IPR048494
QTD79396.1
1 299
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_fHy-Eco03
[NCBI] 		2815753 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTD79396.1 [NCBI]
Genbank nucleotide accession
MW602648 [NCBI]
CDS location
range 24766 -> 25665
strand +
CDS
ATGAGTGATATTCTTGCAGGTGCGCTTGATACTGCTCAAGGTTATTATGACGATGCAAAGAACCGTCTCTTCGGGGACGGTACTACCACTCTGCGCTTCCGCAACTGCGGAGGCGTTGTACTGGACGCAGTTACCAGCGAGGACCATGAGTCTGAGTTGACGATTGCAGACAATACATTAGAGACCGGTGCAAAGGCTTCTGACCACGCAGCACTCGAGCCGAAAGTAATTAGTGTAACCGGCACTGTAGTCGGTTACGATAATACGTCCGTACAAGAGGACTTTATCTCGGATATTACAGGTCTGAGAAGTACAGACTTCCTTGATAACCTTGGGCTGCCATCTGCGATGTCTACTGTAATAGATAAGACTCGAGATATGGTAGTTAATAAGTTAGCTACCTTTATAGACTGGGGCGCACTAGACGCTGCTATATCTTCGTCCTTAGTTCCCTGGTTGCCGGACTTTAGTATCGCCGAGGAATTGAAGACCTCGGATAACATGCGTATTGAACAGATGTACCGTAACTTCCTCGACTTCCAAAAGAATGTCGTATTCTGTACGGTTGACACGGGCATCTTCCAGTATGAAAACATGTTGCTTCAGTCTGTACGTGTAAGACAACAAAAAGATGGTTCTGCCGAATTTACTTTGCGATTCCGTGAAGTTATCGAAGTACCAATCACAGTTACAAACGCTGTTGCTTCTAAGTCGACAGGTCGACCAGGTAACAACGGTACGAAGAAGAGTGGTCGTGCAGCCAGCCAGGGTGATGCAACAAAGAACAAGAACATTAACAACGCAACGTCTATCAAAGACAAAAAGGTCAATGACAACCGCGGCGTAGGTGTTACACTTGGTGATATGCTGGGTGTTAACTTGAGAGGTTTCTTCGGATGA

Tertiary structure

PDB ID
55fec51e8bf5f7009006374cca37b528f22fb3dd7763aad67951b83f9161470a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening of bacteriophage encoded toxic proteins with an NGS based assay Kasurinen,J., Spruit,C.M., Wicklund,A., Pajunen,M.I. and Skurnik,M. 2021-04-24 — GenBank