Protein

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Genbank accession
ADW01313.1 [GenBank]
Protein name
prophage Lp2 protein 53-like protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAKTLSFTDTSPQTVKIGDTTTSFTLICGNDNVATNLTNATSITVKLGNTSGYLKSAKVDPASLTDPTTGQVTVNFNADLMTSLTAGSYAIEVWVVDSTGTSIYPSDGTTGFTITNNIQSTNGTTITTITFDDFVAAMNKAASTIAKGDKGDKGDTGPQGVMTNDQVNTLIDNKIKYTSGNLDVTPAFYKAGTTSSTGALNYVRTGNKLHVSGVVSPSANLAIGSATTLFNLPSSIGIIAENVAVVQQSSGWNLYCLSWNPNGAVSVLKHNIAGTATAITTTTQLQVCADILIK
Physico‐chemical
properties
protein length:294 AA
molecular weight: 30449,68820 Da
isoelectric point:5,24120
aromaticity:0,06122
hydropathy:0,01156

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Sha1
[NCBI] 		947981 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus sp.
[NCBI] 		1591 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADW01313.1 [NCBI]
Genbank nucleotide accession
HQ141411 [NCBI]
CDS location
range 26452 -> 27336
strand +
CDS
ATGGCGAAGACGCTTAGTTTTACCGATACTTCACCACAAACGGTTAAAATTGGTGATACCACCACTAGCTTTACGTTAATTTGTGGCAATGATAATGTGGCAACGAACTTAACTAATGCCACGTCAATTACCGTTAAATTAGGCAATACTAGTGGCTATCTTAAATCGGCCAAAGTTGACCCAGCTAGTTTAACCGACCCCACGACTGGTCAAGTTACCGTTAACTTTAATGCTGACTTGATGACTAGTTTAACCGCTGGTAGCTATGCCATTGAAGTATGGGTGGTTGATAGTACCGGAACGTCAATCTACCCTAGTGATGGGACGACTGGTTTTACAATTACCAATAACATTCAAAGCACCAATGGTACCACGATTACGACCATTACTTTTGATGACTTTGTGGCAGCAATGAATAAAGCCGCAAGCACGATTGCTAAGGGAGATAAGGGAGATAAAGGTGATACTGGGCCACAAGGTGTTATGACTAACGACCAAGTAAACACACTTATTGATAATAAAATAAAATATACTTCTGGCAACCTGGATGTGACGCCGGCATTTTACAAGGCAGGCACAACTAGTAGCACGGGTGCTTTGAACTATGTGCGAACTGGTAACAAACTACACGTTAGTGGTGTAGTTTCTCCAAGTGCAAATTTAGCTATTGGTTCGGCTACGACGTTGTTTAACTTGCCATCTTCAATCGGCATTATTGCAGAGAATGTTGCTGTTGTTCAACAATCATCTGGTTGGAATTTATACTGTTTATCATGGAACCCTAACGGTGCTGTTTCAGTATTGAAACATAACATTGCTGGTACCGCAACAGCTATTACAACTACGACACAGTTGCAAGTGTGCGCTGATATTTTGATAAAGTGA

Tertiary structure

PDB ID
d97a7df4e9021f526487df2ebf12a4e6b7b19f82612e747d615b54027157075b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50