Protein

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Genbank accession
AGW43578.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MSQTAIPLQFEKYLQNQISVGKAPDMNEMIFAYIPNLDPSQPIDRNQGLPAVSTWVHQQDIDQVGKLGDNALVYSVVIPGSVAAFTFNAIYLRDKNVPNSCGMVVHKATETKEAGMASTKNLMQQYTGAAQVAGITVDAQTWQIDYQARLLGIEEDMRLANLDNYGHTAFIQGFDVTQQADPAKYKVAPGVVYVGGLRAELKNEVIQTISAKPTGLYIDVVRTGTVLSKWQNIVTVRASATPLTDYVDQNQQQHYVARLAGINANGSITDWRVKTDNAAQEWSPFINYGIGHEVVSSGLRYIARAASGPDNGGAKDPHSDDELFWDLSLPTSFSTTKNFTPNESWVKIAVVDGELASDPFGGGDAVLISVFGASDYGSLYRFYADIIFSERAGQSSVIIIPKSLGLDNPEFYSKQISSRKFELWMHKTDHYANPLTVTRQSDSFNRTTEVGILERTSITPTDLTIVPYDTGYQFASIPIGMEVAFDTPPPTNDPRFRFVKLTHNDAYNTGLLTSQTLAGSAPELVSTAVISAAQSPINGQTIYLKNTMGVYAVPAATQGIIAQNIPQPSRYRIDSISPGVSLQTGPSISGFIITSAASESQITGGLKPRSFGEVLYKRIY
Physico‐chemical
properties
protein length:620 AA
molecular weight: 67563,13700 Da
isoelectric point:5,31049
aromaticity:0,09355
hydropathy:-0,18984

Domains

Domains [InterPro]
DC_1466
ATT
1–193
DC_1466
IPR022225
ATT
4–153
IPR022225
AGW43578.1
1 620
Architecture
ATT
ATT 1-193 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPUSM 8
[NCBI] 		1341101 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae O1
[NCBI] 		127906 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio
Host Vibrio cholerae O1 El Tor
[NCBI] 		172918 Chordata > Actinopteri > Cypriniformes > Cyprinidae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGW43578.1 [NCBI]
Genbank nucleotide accession
KF361475.1 [NCBI]
CDS location
range 28617 -> 30479
strand +
CDS
ATGAGCCAGACGGCCATTCCACTGCAGTTTGAAAAGTACCTGCAAAATCAAATCAGTGTCGGCAAAGCGCCAGACATGAACGAGATGATTTTTGCCTACATCCCAAACCTTGACCCAAGCCAGCCGATTGACCGTAACCAAGGGCTACCAGCCGTATCAACATGGGTGCATCAGCAAGATATCGATCAGGTAGGAAAGCTCGGCGACAACGCGCTGGTCTATTCGGTTGTGATCCCCGGTTCAGTGGCCGCGTTTACATTCAACGCCATCTATCTGCGTGATAAAAACGTGCCAAACTCCTGCGGCATGGTGGTACACAAAGCCACTGAAACCAAAGAAGCGGGCATGGCGAGCACCAAAAACCTAATGCAGCAATACACAGGTGCAGCGCAAGTAGCAGGCATTACTGTAGATGCGCAAACGTGGCAAATCGACTACCAAGCCCGCTTGTTGGGTATTGAAGAGGATATGCGCCTCGCGAACTTGGATAACTACGGGCACACCGCATTCATTCAAGGCTTTGATGTCACCCAGCAAGCAGACCCAGCCAAATACAAAGTAGCACCGGGTGTGGTGTACGTGGGCGGCTTGCGTGCCGAGCTAAAAAACGAAGTCATTCAAACCATCAGCGCCAAGCCAACGGGTTTGTATATCGATGTTGTTCGCACGGGTACCGTGCTATCAAAGTGGCAGAACATCGTCACCGTTCGCGCCTCCGCAACACCGCTCACCGACTACGTTGACCAAAACCAGCAGCAACACTACGTTGCAAGGCTGGCGGGGATTAATGCGAATGGGAGTATCACAGATTGGCGTGTAAAAACAGACAACGCTGCTCAAGAGTGGTCGCCATTTATTAACTACGGCATCGGCCACGAAGTTGTTAGCAGTGGCTTGCGCTATATCGCCCGCGCTGCGTCAGGGCCAGATAATGGTGGGGCAAAAGACCCTCATTCAGATGATGAATTATTTTGGGACTTGTCACTCCCGACATCATTTTCTACAACGAAAAATTTCACACCAAACGAGTCGTGGGTAAAAATTGCAGTTGTGGATGGCGAATTAGCTTCAGACCCTTTCGGCGGCGGTGATGCAGTGCTTATTTCTGTTTTCGGTGCGTCCGACTATGGAAGCTTATATCGCTTCTATGCAGATATAATCTTTTCAGAGCGAGCAGGACAATCGAGCGTTATAATCATTCCTAAATCACTTGGTCTGGACAACCCTGAGTTTTATTCAAAGCAAATATCTTCAAGAAAATTCGAGCTTTGGATGCATAAAACTGACCATTACGCTAACCCGTTGACAGTAACTAGGCAGTCTGATTCGTTTAATCGAACAACGGAGGTTGGTATTTTAGAGCGGACTAGTATTACTCCAACAGACTTAACAATAGTACCCTACGACACGGGCTACCAATTCGCATCTATTCCAATCGGAATGGAAGTGGCCTTCGATACGCCGCCGCCGACAAATGACCCGCGCTTTCGCTTTGTAAAACTGACGCACAATGATGCTTACAACACAGGTTTGCTAACATCACAAACGCTTGCGGGTAGTGCGCCAGAGCTAGTTTCGACAGCTGTAATTTCAGCAGCGCAAAGCCCTATCAATGGGCAGACTATTTATCTTAAGAACACAATGGGGGTATATGCGGTACCTGCCGCAACGCAAGGAATAATTGCACAAAACATACCCCAGCCATCCAGGTACAGGATAGACAGTATAAGTCCTGGGGTTAGCTTGCAAACTGGCCCAAGTATCTCTGGATTCATCATAACTAGTGCAGCTTCCGAATCTCAGATTACTGGTGGTTTAAAACCACGCAGTTTTGGTGAAGTCTTATACAAGAGGATTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
036d7db7cd8bd2de484bd79a841cd0adbd06dc3d78841c849b2d8d5d1ad8d1cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50