Protein

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Genbank accession
YP_009218801.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPNAAPGVRGIAAIATEAMIDAGTDNETIVTPALLAYRLQNPHASQTVWGYTRYATDAEAVSVTNDLVSLTPRSVDVVFNTRHASETVWGSAKLSTTAQATAGTDDTTSMTPLKVKQAISALVPVQSNATESAFGLVQLATVAEVRAGTIRDGFAISPYTFIRLNATESDLGIVRLASQGDVNTGTDDTKAVTPLKLSNLKGSGSTFGLVKLSTEVNTGLANTALSAGANVVPSNRNSAITGGALYQGSVAPANKYQTHSDIEASLPIGCMMMAAFNSDYGNVYIANGRGLITTEYPELFARIGYTYGGSGNIFNLPDMRGVAARGFDAGRGLDPGRGFGTYQADMFAYHEHNLQMILLNGGNIPSSQAVYELKWAEKNDQRIYDLDPAYSKAKGVGGNETRMKNLAVNYVIRVR
Physico‐chemical
properties
protein length:415 AA
molecular weight: 43913,75700 Da
isoelectric point:5,99892
aromaticity:0,07470
hydropathy:-0,12723

Domains

Domains [InterPro]
DC_0176
STR
2–371
DC_0176
IPR037053
ATT
255–320
IPR037053
SSF88874
STR
257–414
SSF88874
IPR011083
ATT
269–322
IPR011083
YP_009218801.1
1 415
Architecture
STR
ATT
STR
STR 2-254 | ATT 255-322 | STR 323-414 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage IME-CF2
[NCBI] 		1673887 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus imecf2
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009218801.1 [NCBI]
Genbank nucleotide accession
NC_029013 [NCBI]
CDS location
range 176410 -> 177657
strand -
CDS
TTGCCTAACGCTGCTCCTGGGGTGCGTGGTATCGCGGCTATTGCTACCGAGGCTATGATTGACGCAGGTACAGACAATGAAACGATAGTTACTCCTGCATTGCTGGCATATCGTTTACAGAATCCTCATGCGTCACAAACTGTATGGGGTTATACCCGATATGCGACTGATGCAGAAGCCGTTAGCGTGACTAACGATTTGGTTTCATTAACTCCGCGTTCTGTCGATGTGGTTTTTAATACCAGACACGCATCAGAAACCGTATGGGGTTCCGCTAAACTGTCAACAACTGCACAGGCAACAGCAGGTACTGACGACACCACGTCGATGACTCCGTTGAAAGTGAAACAAGCAATTTCCGCGCTGGTTCCGGTTCAGTCTAACGCAACAGAAAGCGCGTTCGGTTTGGTTCAGTTGGCTACTGTTGCAGAAGTTAGAGCGGGTACAATTCGCGATGGTTTTGCGATTTCACCATATACGTTTATTCGTCTGAACGCAACTGAAAGCGATCTGGGTATTGTTCGCCTGGCAAGTCAAGGCGACGTAAACACAGGAACCGATGACACGAAAGCAGTCACACCGCTTAAACTGTCGAACCTTAAAGGCTCCGGTAGTACGTTCGGTTTGGTTAAATTATCTACAGAAGTAAACACAGGGCTGGCTAACACTGCACTTTCTGCGGGGGCTAACGTAGTACCTAGCAACCGAAACAGCGCTATCACTGGCGGTGCATTGTATCAAGGTTCTGTTGCTCCTGCTAATAAATACCAGACACATAGTGACATTGAAGCATCGCTTCCAATTGGTTGCATGATGATGGCGGCTTTCAACTCAGATTACGGTAACGTGTATATTGCCAACGGTCGAGGGTTGATTACTACCGAATATCCTGAACTGTTTGCGCGTATAGGCTACACGTATGGCGGTAGCGGTAACATTTTCAACCTTCCAGATATGCGCGGCGTTGCTGCTCGTGGTTTTGATGCTGGAAGAGGTTTAGACCCAGGTCGTGGTTTTGGTACATACCAAGCGGATATGTTTGCATATCACGAGCATAATCTGCAAATGATTTTGCTTAACGGTGGCAATATTCCATCAAGCCAAGCAGTTTACGAACTGAAATGGGCTGAGAAGAACGATCAGAGAATATACGATTTAGACCCAGCATATAGCAAGGCTAAAGGTGTTGGTGGTAACGAAACGCGAATGAAGAACCTTGCGGTCAACTATGTAATTAGAGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37d1b73c772a3ebab34b35d0bdc9f39c170ad064c16e74466e9d7ecde4ef2b00
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50