Protein

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Genbank accession
AXF41160.1 [GenBank]
Protein name
unknown
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTINVGSVQGSPTVTGDLTVSGTIKSSGVRHPSANTDAISAAADGTVTVAGVVKTTAIQDLSGNTLGGGQVLQVVQRVSNSYGEFGNSSYQNNINNLTAIGDWYIDITTTKANSKILCQWKTKMYGPNTQHQYVDLRRRIGSGGFTSLVDAYRSNSTIDTFAGIHWQNGNGAFEGDYFSAFIDTPNQPAGTSLRYQQYLGGWAGGTIDFGGWDANNNQNARGMIVMICYELAP
Physico‐chemical
properties
protein length:234 AA
molecular weight: 24899,17620 Da
isoelectric point:5,84097
aromaticity:0,09402
hydropathy:-0,28248

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM4
[NCBI] 		1048189 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41160.1 [NCBI]
Genbank nucleotide accession
MH512890 [NCBI]
CDS location
range 17194 -> 17898
strand +
CDS
ATGTCAACGATTAATGTAGGATCCGTTCAAGGCAGTCCAACGGTAACAGGTGATTTAACTGTCAGTGGAACAATTAAGTCGTCTGGCGTCCGACACCCATCTGCTAACACAGATGCAATTTCTGCTGCTGCGGACGGAACGGTGACTGTGGCAGGTGTTGTTAAGACAACTGCAATTCAAGATTTATCAGGTAATACGCTTGGTGGTGGTCAAGTTTTACAAGTTGTTCAAAGGGTTAGTAACTCATATGGTGAGTTTGGTAACTCAAGTTATCAGAACAACATTAATAACTTAACTGCTATTGGTGATTGGTATATTGACATTACGACTACAAAAGCAAACTCTAAGATTTTGTGTCAGTGGAAAACTAAGATGTATGGTCCTAACACTCAGCACCAATACGTTGACTTAAGAAGAAGAATCGGTAGTGGTGGTTTTACTTCATTAGTTGATGCTTATAGATCAAATAGCACTATTGATACATTTGCAGGAATTCACTGGCAAAATGGTAACGGTGCTTTTGAAGGAGACTACTTCTCAGCATTCATTGATACACCAAACCAACCTGCAGGTACGTCACTTCGTTACCAACAATACCTTGGAGGTTGGGCAGGAGGAACTATCGACTTCGGTGGTTGGGATGCTAACAACAACCAAAACGCTCGTGGTATGATTGTTATGATCTGCTATGAACTTGCACCTTAA

Tertiary structure

PDB ID
b509a85737eee4d17a69366ffe9d15beb97b8ae3cfbab095da3e6143e971761f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic island variability facilitates Prochlorococcus-virus coexistence Avrani,S., Wurtzel,O., Sharon,I., Sorek,R. and Lindell,D. 7353 21720364 GenBank