Protein

View in Explore
Genbank accession
AMQ65931.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTIAVANTTLANTFGHWLTRVNEIADALSTRVITVNSNTTIGNASIQGTFTANVINCDTITATDGSTEILAANLVVQSTGGLVTLGIVNIKNDITFDAVSKIRVVGSNTTHTFLAANPATGNLEFQRILIPLDQITDVDTTNAGKSNTSILMWSTATGKWQTNTITLIDQTRINTLNVGSVSSSLTVAGNTTLANSTVSVISTSRRVGINVSSPQAALHVNGAIVATGDIQGFYTSDKNFKLNITDVDDQKMLDEILAIDIKEFDWDAVAVAKSNYVSDLNNGHDVGVIAQDLQKSNPDWVTERPDGTLAVNYMKAIPRLIGAVKVLHSLLQEKEKKRGK
Physico‐chemical
properties
protein length:340 AA
molecular weight: 36299,49480 Da
isoelectric point:5,53353
aromaticity:0,04706
hydropathy:0,00794

Domains

Domains [InterPro]
DC_1797
STR
1–264
DC_1797
DC_0133
RBD
234–338
DC_0133
IPR030392
CHP
236–338
IPR030392
IPR030392
CHP
236–301
IPR030392
AMQ65931.1
1 340
Architecture
STR
RBD
STR 1-264 | RBD 265-338 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS-DLP_6
[NCBI] 		1651816 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMQ65931.1 [NCBI]
Genbank nucleotide accession
KU682439.2 [NCBI]
CDS location
range 164457 -> 165479
strand +
CDS
ATGACAATTGCTGTCGCCAACACAACTCTTGCGAACACGTTCGGTCACTGGCTGACCCGCGTGAACGAGATCGCAGACGCGCTGTCGACGCGAGTGATCACCGTTAACTCGAACACTACGATCGGTAACGCATCGATCCAAGGCACATTCACTGCCAACGTGATCAACTGCGATACCATCACCGCTACAGACGGCTCGACGGAAATCCTCGCAGCCAACCTTGTTGTACAGTCAACAGGCGGCTTGGTCACCCTTGGCATCGTCAACATCAAGAACGACATCACGTTCGACGCCGTCTCCAAGATCCGTGTCGTTGGTTCCAACACCACGCACACGTTCCTCGCGGCTAACCCGGCAACGGGCAACCTCGAATTCCAGCGCATCCTGATCCCTCTCGATCAGATCACTGACGTTGACACCACGAACGCCGGCAAGTCCAACACATCTATCCTGATGTGGAGCACGGCAACCGGTAAGTGGCAGACCAACACGATCACGCTGATCGACCAGACCCGCATCAACACGCTGAACGTCGGAAGCGTCTCCAGCAGCCTGACCGTTGCTGGCAACACCACTCTGGCAAACAGCACGGTCAGCGTCATCAGCACCTCGCGCCGTGTTGGTATCAACGTGTCAAGCCCGCAGGCGGCGCTGCACGTCAACGGTGCTATCGTGGCAACCGGCGATATCCAAGGTTTCTACACCTCGGACAAGAACTTCAAGCTCAACATCACCGACGTTGACGACCAGAAGATGCTCGATGAGATCCTCGCGATCGATATCAAGGAATTCGACTGGGATGCTGTGGCGGTCGCGAAGAGCAACTACGTCAGCGATCTCAACAACGGTCACGACGTCGGCGTCATCGCTCAGGATCTGCAGAAGTCCAATCCAGACTGGGTGACAGAGCGCCCAGACGGTACTCTCGCAGTCAACTACATGAAGGCTATTCCGCGCCTCATCGGCGCTGTCAAGGTTCTGCATTCTCTGCTGCAGGAGAAGGAGAAGAAGCGTGGCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a6ee387aa8aed1cebfa9892ee6d85605e0fc02916991a73329402e5db220015
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and characterization of chimeric Stenotrophomonas maltophilia phage DLP6 Peters,D.L. and Dennis,J. 2017-03-14 — GenBank