Protein

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Genbank accession
YP_009782943.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGEVLYTNVAPIDENSNLDLTSPNNVLYKYNSIEGGIIVPRGASLVGTDLRRTKIIPKYVPYPTVFAAKGINTEDQVPSRTSIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVETLAPKFSHHRLTCFEFADGVNSLSTLISQGRVPNSDYSAVPNILERTDLEIYYQKVSKAFASIPDTSGDPAADQIQARVEENRIVGPISDEYRVLQITRNGNTATAVTVDEFDNPRDHGFSVGVNINISGVTGSTGPQSELDASLYNGSFTVTSASGNIFTYQMIQEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMLADGSRATGFKSMVVAQFTGLSLQKDDRAFVRYNESTGNYDVASAGDGAHLDGFAEYRKGWAHRHIVASNDAFIQAVSVFAVGYGSHFTCESGADMSITNSNSNFGNTALRAAGFKAKSFSKDKAGEITHIVPPKALNVISTIASGASGEASITLANDGSVNGVVQGMTVTGDNIGTGATVVSVNTNTRIITLSVVNSDAVNGNVIFGEETSVNWVNIDIQRTKVINQSLAGAGGTPGTRLYLYGYTAPAGAPTTRVQGYTVGARQDGTGVSAIPDKINCLLVAQGATEATVQSAFISPYGPSVSGLAAGVAGSPIQYDSNTYTISGVAGQVGGWYLSVDSVDNDIYTTLSTNTRYNNVNFTPTTFLRRIPDPRDLADRTFRIRLKIDKDKTNPLPRDPLSGYVLQPLNSDSTNYKLDKTFYIYDIEKVQEFERGVSDGLYYITLLCASITPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPNPAVSVADNETIGLVYSTDGATPTPNKDPKRSITKEAIKFLLTDTGWTQPGTTPNFDSVNNRLSNVELTARAGDEEVRKINIRENNDGTVAPIPVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGQVSSTSNLIAKKITYNNQDGTVIKQTLLAPEDALGQPDFTNITGYTTPSDGDLVYNINWTPGKSLGWIYYQGLWKEFGITDTGQIDIQTFVDGDGVDQQHLGFGVAANSTYRANILGNVRIDGNLTTTGTGGISADKYVTRTYTGDGNTLTYNITTFTGGVKHTADSLLVFLNGVAQIGGTNFSVDANGANIIFGAGDAPLSTDTIHIIELPI
Physico‐chemical
properties
protein length:1325 AA
molecular weight: 142719,46900 Da
isoelectric point:4,81099
aromaticity:0,09283
hydropathy:-0,23419

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009782943.1
1 1325
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9752
Central domain 91 310 221 0,9347
C-terminal 311 1325 1014 0,0512
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-310
C-terminal
311-1325

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM8
[NCBI] 		756278 Uroviricota > Caudoviricetes > Pantevenvirales > Neptunevirus > Neptunevirus srim18
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009782943.1 [NCBI]
Genbank nucleotide accession
NC_047733.1 [NCBI]
CDS location
range 22936 -> 26913
strand +
CDS
ATGGCTCTTACTAGACTTAAGAATATTATTACGTCCAGAACTGGACGTATTATCTACGTTAACCCTGACGATTTCGATGCATCTGATGCTATTGATAATAGGGGAAACTCTGCACTTCGTCCGTTTAAGTCTATTCAGAGGGCATTCTTAGAAGTTGCTAGATTTTCGTATCGAGTCGGTCTGTCAAACGACGAATTTGACGCCTTCTCGATTATGCTTTATCCAGCAGAATATGTTGTTGATAACAGACCTGGAGAAGTTCTTTATACAAACGTTGCTCCTATTGATGAAAACTCTAACTTAGATTTAACATCACCAAACAACGTTCTTTACAAATATAATTCTATTGAAGGTGGTATCATTGTTCCTAGAGGTGCTTCCCTCGTTGGTACTGACCTTCGTCGTACAAAAATTATTCCTAAGTATGTTCCCTATCCTACAGTATTTGCTGCAAAGGGAATCAACACAGAAGACCAAGTTCCTTCTAGAACTTCAATCTTTAAGGTAACTGGTGGTACTTATTTCTGGCAATTCTCGTTCTTTGATGGTGCTGAAGAGGGTGTCTATTTCAAACCAGATAGTGTAGAAACACTTGCACCTAAGTTCTCTCACCATAGATTGACATGTTTCGAGTTTGCTGATGGTGTAAACTCTCTTTCAACTCTTATTAGTCAAGGAAGAGTACCAAACTCAGACTATTCTGCAGTCCCTAATATCCTTGAAAGAACTGACTTAGAGATTTACTATCAGAAAGTATCGAAAGCATTTGCATCAATTCCCGATACATCTGGAGACCCTGCAGCAGACCAAATTCAGGCAAGAGTTGAAGAAAACAGAATCGTTGGTCCTATTTCTGACGAATATCGTGTTCTTCAAATTACTCGCAACGGCAATACTGCAACCGCAGTTACTGTTGATGAATTTGATAACCCCAGAGACCATGGATTCTCTGTTGGTGTTAACATTAACATCTCTGGTGTTACTGGTTCTACTGGACCACAATCAGAACTGGATGCTTCCTTGTATAATGGTTCATTCACAGTAACATCTGCGTCTGGTAACATTTTTACCTATCAGATGATTCAAGAACCTACAGGTAATGCCGTTGGTTCTAACATTACAGTTAAGACTGAGATTGATACTGTTGACTCTGCATCACCATATGCGTTCAACTTGTCTCTTAGAAGTGTCTGGGGCATGAATGGAATGCTCGCAGATGGTTCTCGTGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACGGGTCTATCTTTGCAGAAAGATGATAGAGCGTTTGTAAGATATAATGAGTCTACTGGTAACTATGATGTTGCATCTGCTGGTGATGGTGCTCACTTAGACGGTTTTGCTGAGTATCGTAAAGGTTGGGCACACAGACACATTGTTGCATCTAACGACGCATTTATTCAGGCAGTTTCGGTGTTCGCGGTTGGATATGGTTCCCACTTCACTTGTGAGAGTGGTGCTGACATGTCCATTACCAACTCTAACTCCAACTTCGGTAATACCGCTCTTCGTGCTGCTGGATTTAAGGCAAAATCTTTCTCTAAAGATAAAGCAGGAGAGATTACACATATTGTTCCACCTAAAGCACTTAATGTTATTTCAACAATCGCAAGTGGCGCTAGTGGCGAAGCATCAATCACTCTTGCAAATGATGGGTCGGTTAATGGTGTTGTTCAGGGAATGACTGTTACTGGAGACAATATTGGAACTGGAGCAACAGTTGTCTCTGTCAATACAAATACTAGAATTATTACACTTTCGGTAGTTAATTCTGATGCAGTTAATGGCAACGTAATTTTTGGTGAAGAAACTTCTGTTAACTGGGTCAACATTGATATTCAACGTACTAAAGTAATTAACCAGTCTCTTGCTGGTGCTGGTGGTACTCCTGGCACCAGACTTTACCTCTATGGATATACTGCTCCTGCGGGTGCCCCAACAACCAGAGTTCAGGGTTATACAGTTGGCGCTCGTCAAGATGGTACTGGAGTAAGTGCAATTCCTGATAAAATTAACTGCTTATTGGTTGCCCAAGGTGCAACTGAGGCGACAGTACAATCTGCATTTATTTCACCCTATGGTCCCAGTGTATCTGGTCTCGCTGCTGGTGTTGCTGGTTCACCCATTCAGTACGATAGCAATACCTACACTATTAGTGGAGTTGCTGGACAAGTCGGTGGTTGGTATCTTTCTGTTGATTCTGTAGATAATGATATCTACACAACACTGTCTACTAATACTCGTTATAACAATGTTAACTTTACTCCAACTACATTCTTAAGAAGAATCCCTGACCCTAGAGACCTTGCAGACAGAACATTCCGTATTCGTTTGAAGATTGATAAAGATAAGACTAATCCATTACCCAGAGATCCCCTGAGTGGTTATGTACTACAACCATTGAATAGTGATAGTACAAACTACAAACTTGATAAAACTTTCTACATTTACGATATTGAAAAAGTACAAGAGTTTGAGAGAGGTGTTTCCGATGGACTTTACTACATTACCCTCCTTTGTGCATCTATTACACCTTCAACTTCTAACTTCAACGATAGAAAGTTCTCCCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTAACCCTGCTGTATCCGTCGCTGACAACGAAACTATCGGTCTAGTATATTCTACTGATGGTGCAACTCCAACTCCAAACAAAGACCCCAAACGTTCTATTACTAAGGAAGCGATTAAGTTTCTTCTGACTGATACTGGTTGGACACAACCAGGTACAACACCCAACTTTGACTCTGTTAATAATAGACTTTCTAACGTTGAACTTACTGCTCGTGCTGGTGATGAAGAAGTTAGAAAGATTAACATCAGAGAGAACAATGATGGAACAGTTGCTCCTATTCCAGTAGAGTTCAGAAGGCACTCCATCTTACGTTCAGGTAACCATACGTTTGAATATCTTGGTTTCGGTCCTGGTAACTATTCTACCGCATTCCCCCAGACTCAGGTAGAAACTCTGAGTGCAGACCAAGTTAAGTTCTCGCAGTCTATTAAGGAAGAAGCAGGTGTTGCTTTCTATTCTGGTTTGAACTCTAACGGTGACCTGTTTATTGGTAACCAGGTTATTAACCCTGTTACTGGTCAAATTACAAACGAAGATATTGCACAACTGAACGTTGTTGGTGAAGAAAATACAACAATTGAAACATTCTCTGAGTTGGTTCTTACCGATAAACTTACGGTTATTGGTGGTGCATCTAACCAGTTGGAATCTATCTTTGCTGGTCCTGTTACTTTCCAAGGTCAAGTATCTTCTACTAGTAACTTAATTGCTAAGAAGATTACCTACAATAACCAAGATGGTACTGTTATTAAACAGACCTTACTTGCACCAGAAGACGCACTGGGTCAACCAGACTTTACTAATATCACTGGATATACCACACCTTCCGATGGTGATTTAGTTTACAACATTAACTGGACACCTGGTAAATCTCTTGGATGGATTTACTATCAAGGTCTTTGGAAAGAGTTTGGAATCACAGATACAGGTCAAATTGATATTCAAACGTTTGTAGATGGTGATGGTGTAGACCAGCAGCATCTTGGTTTTGGTGTTGCTGCTAACAGCACTTATAGAGCAAACATTCTTGGTAATGTTCGAATTGATGGTAACTTAACTACAACTGGTACTGGTGGTATTTCTGCTGACAAGTATGTCACCAGAACATATACTGGTGATGGCAATACTCTCACCTATAATATCACCACATTCACTGGTGGTGTTAAGCATACGGCGGATTCTCTGCTAGTATTCTTAAATGGTGTTGCTCAGATTGGTGGAACTAACTTCAGCGTTGATGCAAATGGTGCCAACATTATCTTCGGTGCTGGCGATGCACCACTCTCTACGGATACGATTCATATCATTGAATTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db6bd3810fa111dc0f93dee3ca03c33ea3915daf9567e76afb789808443fa8e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50