Protein
View in Explore- Genbank accession
- YP_009099075.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTFTSP
- Protein sequence
-
MQFQPHLGREFKDNYKPQDRLNFMSLAKVIKVHHKHHTADVQLIRTNDTIRSSEESEGKYSAKILTQGAHFDDATIGTSGVMYPIQEGQLVVVAFLDGVYTQPIIIGSTHNNKMDEFNILPNRYPLRPDTSLEDMREALKYLNVHPSQFYTMIDGIGSVEMSHPSKTFLKIDPDLYSEISDEHGGFDHQHLTERDPMTYRPRSAKTENTAYPVKMLFNYRTSFEDTDTTWTKFFLSSDGMFRVTRDTNDEAITYQELGARGEYKIRRQLDSSKHGEGKDFVELVIEETGRTTIKRSVDGNESRIEISELGDIALENSTDTYVRVTVDGDINLRADGELNITTENGRAFPVLVSSEEPPNPKDGLIWLDTSIPTEVPKP
- Physico‐chemical
properties -
protein length: 378 AA molecular weight: 43002,45480 Da isoelectric point: 5,12826 aromaticity: 0,08466 hydropathy: -0,65503
Domains
Domains [InterPro]
DC_0015
STR
1–362
STR
1–362
IPR037026
ATT
13–113
ATT
13–113
1
378
Architecture
STR 1-12 | ATT 13-113 | STR 114-362 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
378
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 301 | 301 | 0,3031 |
| Central domain | 302 | 367 | 67 | 0,1275 |
| C-terminal | 368 | 378 | 10 | 0,9962 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-301
1-301
Central
302-367
302-367
C-terminal
368-378
368-378
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage CP-51 [NCBI] |
1391188 | Uroviricota > Caudoviricetes > Herelleviridae > Siminovitchvirus > Siminovitchvirus CP51 |
| Host |
Bacillus cereus [NCBI] |
1396 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
YP_009099075.1
[NCBI]
Genbank nucleotide accession
NC_025423.1
[NCBI]
CDS location
range 26170 -> 27306
strand +
strand +
CDS
ATGCAATTTCAACCACATCTTGGTAGGGAATTTAAAGATAACTATAAGCCACAGGACAGACTTAACTTTATGTCCTTGGCTAAGGTTATCAAAGTCCACCATAAGCACCATACAGCAGATGTGCAGTTGATTAGAACTAATGACACCATACGTTCCAGTGAAGAATCTGAAGGTAAGTATAGCGCTAAGATACTTACACAAGGTGCTCACTTTGATGATGCAACAATAGGAACATCTGGTGTCATGTACCCTATCCAAGAAGGTCAGCTAGTAGTAGTTGCCTTCTTAGATGGAGTATATACACAACCAATTATCATTGGTAGTACACACAATAACAAAATGGATGAGTTTAACATCCTTCCTAACCGATATCCATTAAGACCTGATACTTCCCTAGAGGATATGAGGGAAGCATTAAAGTATCTTAATGTACATCCATCCCAGTTCTATACGATGATAGATGGTATAGGTTCGGTGGAGATGTCCCACCCTTCTAAGACTTTTCTAAAGATTGACCCTGACCTATACAGTGAGATATCTGATGAGCATGGAGGGTTTGACCATCAACACTTAACAGAGCGTGACCCTATGACATATAGACCTCGTTCTGCTAAGACAGAGAATACTGCATACCCTGTTAAGATGCTCTTTAATTATAGAACTAGCTTTGAGGACACTGATACTACTTGGACTAAGTTCTTCCTTAGTAGTGACGGAATGTTTAGGGTAACTAGGGATACTAACGATGAAGCTATAACTTACCAAGAGTTAGGTGCACGTGGGGAATACAAAATTCGTAGACAACTGGATAGCTCTAAGCACGGTGAGGGCAAGGACTTTGTAGAGCTGGTTATTGAAGAAACAGGTAGAACTACTATTAAAAGGTCTGTAGATGGCAATGAGTCTAGGATAGAGATAAGCGAGCTAGGAGACATAGCACTAGAGAATTCTACAGATACCTATGTTAGAGTAACTGTTGATGGGGATATTAATTTACGAGCGGATGGGGAACTAAACATCACAACGGAAAACGGTAGAGCTTTTCCAGTATTGGTTTCTAGCGAAGAACCGCCAAACCCAAAGGACGGGTTAATTTGGTTAGACACAAGCATTCCAACGGAGGTGCCTAAGCCATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
b4d97f81759a3733d751de4993baf8eb34caa7597e61c85ab2fcec6048abd475
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Characterization of Three Phages Infecting Bacillus cereus sensu lato Group of Bacteria Reveals Differences in Host Range, Genomic and Proteomic Diversity | Klumpp,J. and Loessner,M.J. | 2010-04-06 | — | GenBank |