Protein

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UniProt accession
A0AAF0LZL1 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNILRSFTETVVTTPTDTFSISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKIEPAIPEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAAAAAEEAAQQTRMAEKVIDKSGLTQQQINDAWLTVENFGAKGDGVTDDSAAFQAYCDSPFTGANIRLANRRAVYIIKKQVDCKGKGIVGNGFGKQSQAAYDLSSIRVMEGDYTNSNADLADIAFINVGAEVRNLQFVSSKLGTISGINVSGYNTTINNVNFTGFKNQVHVVGASVRFSVSDLTSIGAANAGFYFRDKQSDQSTTAYFNQCSWQWGNKAVVFEKEAYGCVFRDNIVEYMDGGFEASVFSNCIFEGNWCESTRSGNAIDWIVNTSYQQLFNCKFGVNYIRAPWLDRTNPNDIAGSNSAGGIQAKNSSVAVTGATGAKIRLNTNGLSTGFADWFGVSNSPLSSRALLLTTQDRASGSNYDTPIVIAAPNGCLWERNRSATDYTPVTKRRLIGANADNTAAYYGVDTYTKRVRKWSTFEHTTNTSGQFLAPIMLTYDSTATTQQVNAGWSITKEAGTTGIYILQRTASTVAPLANPNFVVGGIFTGSITGTLAAVSYSLQAIETYSGSWTVYKEAAGFKIAFRDQDGALVNVNRFTAMFTVVSGF
Physico‐chemical
properties
protein length:693 AA
molecular weight: 75395,99000 Da
isoelectric point:5,06216
aromaticity:0,10678
hydropathy:-0,18759

Domains

Domains [InterPro]
DC_1263
ATT
1–363
DC_1263
Coil
Unmapped
122–152
Coil IPR012334
IPR011050
STR
171–460
IPR011050
IPR024535
ENZ
175–377
IPR024535
DC_0160
STR
293–693
DC_0160
A0AAF0LZL1
1 693
Architecture
ATT
STR
ATT 1-363 | STR 364-693
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0AAF0LZL1
1 693
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9948
Central domain 192 478 288 0,9830
C-terminal 479 693 214 0,9807
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-478
C-terminal
479-693

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage pB3074
[NCBI] 		3038303 No lineage information
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098994 symbiont entry into host cell via disruption of host cell envelope Biological Process IEA:UniProtKB-KW (UniProt)
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
9602647ee9cdee00031431374432099bc82f921a96336ed84935e3174b2cb875
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6498
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50