Protein

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Genbank accession
AAR27389.1 [GenBank]
Protein name
putative protein
RBP type
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MGYRIIAYDKPTDKNGYIVYDQSLPTRNLVSGSLNLKLTDIDDLDITVNQNNPLYDNVEPLITHVEVYEDDALIFRGRAIKPIKEMASNGGFTREYVFEAIDAYLLDSIQRFDNDSGSSAKQYLQKLIKVHNEQLNDTYKHFTLGNCDYSDSEGIVQRQIDYPTTKEAITAQLINKSGGYIRVRYDHDKQTNYIDYTKTIGVSHKADTPISVGKNMLSAKQTIDPTGIITRLIPLGKVQPSPKINLGNDDTLDEHGVPISGTTHAVNGDWGPAIRYAAKLMGVNITDDYVEKIKRMIQGESGGSETVVNTIDSNAAAGHPSAGLLQFIEETFKHYCVKPFTTWKAGFDQLLCLFNMDDWQSEVDKWQIYHSWSPNGNPRLKEVSTTTVHKTSHNTWGWPFPSVGEGHFMEAQLFGVHAGNGRTNNFHDGLDFGSIDHPGSEVHAIHGGTVTRIGSDGYIGWYVVTHSRDGYDIVYQEAFSSRGNIKVSQGQTIKTGDVIGIRDTSHVHIGVTKKSWYEGYTKGHSFDPNWAWLDPLKLIKEGGQKGDKDSTSTTYEDESPQPRFNITSVNGGKDYIEDADLIRQFGVIEGTKIFDDLQDPAQIKQMGEKWLANEKQHVTKNSFEVSALELPEFDRFRVGDSYQFINPQVSKTAQLLQVVEKDIDFAHERNSSLKIADVAKSLTDYQIEDGKKINARFQSIQKTLAQQSLTIANLSSGAMSAESSNNQTNQKVQHVSEQSDFNAQKIKDELDKHLTDYAKVKKFLDEELPIKYATVEQLKSFGERLDKLEQKGESDG
Physico‐chemical
properties
protein length:796 AA
molecular weight: 89229,22480 Da
isoelectric point:5,47538
aromaticity:0,09171
hydropathy:-0,61068

Domains

Domains [InterPro]
DC_1139
ATT
2–195
DC_1139 IPR050570 DC_1956
IPR010572
ENZ
119–687
IPR010572
IPR011055
RBD
410–543
IPR011055
IPR011055
RBD
413–517
IPR011055
IPR016047
ENZ
426–513
IPR016047
cd12797
ENZ
427–511
cd12797
AAR27389.1
1 796
Architecture
ATT
ENZ
RBD
STR
ATT 2-195 | ENZ 196-409 | RBD 410-537 | STR 538-793 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAR27389.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 268 268 0,9697
Central domain 269 597 330 0,2352
C-terminal 598 796 198 0,0120
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-268
Central
269-597
C-terminal
598-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus prophage Lj928
[NCBI] 		139872 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus johnsonii
[NCBI] 		33959 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR27389.1 [NCBI]
Genbank nucleotide accession
AY459533 [NCBI]
CDS location
range 30245 -> 32635
strand +
CDS
GTGGGATATCGGATTATAGCATATGACAAGCCGACAGATAAGAATGGCTATATAGTGTATGACCAGAGCCTTCCAACAAGGAACTTAGTATCTGGAAGTTTAAATCTTAAATTAACAGATATTGATGATCTTGATATCACTGTTAATCAGAACAATCCTCTCTATGACAATGTAGAGCCGTTAATTACTCACGTTGAAGTCTATGAAGATGATGCGCTTATCTTTCGTGGACGAGCGATTAAACCAATCAAAGAGATGGCTTCAAATGGTGGATTTACTCGTGAATACGTTTTTGAAGCTATTGATGCTTATCTTTTAGATAGCATTCAACGCTTTGATAATGATTCTGGGTCAAGTGCTAAGCAGTACTTACAGAAACTAATTAAGGTGCATAATGAGCAGTTGAATGATACTTATAAGCACTTTACACTTGGTAACTGTGATTATTCAGACAGCGAAGGTATTGTTCAAAGGCAGATTGATTATCCGACTACTAAAGAAGCAATTACAGCCCAGCTAATTAATAAAAGCGGTGGTTATATTCGAGTTAGATATGACCACGATAAACAGACAAATTATATTGACTACACAAAAACAATAGGAGTATCGCATAAGGCTGATACTCCTATTTCTGTAGGTAAGAATATGTTATCGGCTAAGCAGACCATTGACCCTACTGGGATAATCACTCGATTAATCCCGCTTGGTAAGGTTCAACCATCGCCTAAGATTAATTTAGGAAACGATGATACACTCGATGAACATGGTGTTCCTATTTCAGGAACAACCCATGCTGTTAATGGCGATTGGGGACCTGCTATTAGATATGCTGCTAAGCTTATGGGCGTAAACATAACTGATGATTATGTTGAAAAGATTAAGCGCATGATACAAGGCGAAAGTGGTGGATCTGAAACTGTTGTTAACACAATAGACAGTAATGCAGCTGCTGGTCACCCAAGTGCGGGGCTATTGCAATTCATTGAAGAAACTTTTAAGCATTATTGTGTTAAACCGTTTACTACTTGGAAAGCTGGGTTCGATCAGCTCTTATGCTTATTCAATATGGACGACTGGCAATCAGAAGTTGATAAGTGGCAGATCTATCATTCGTGGTCACCTAACGGTAATCCACGCCTTAAAGAAGTAAGTACTACTACAGTTCATAAAACATCACATAATACATGGGGTTGGCCGTTTCCTAGCGTTGGCGAAGGTCACTTCATGGAGGCACAACTTTTTGGCGTTCATGCAGGTAATGGAAGAACCAATAATTTTCATGATGGGCTTGATTTCGGTAGTATTGACCACCCTGGAAGTGAAGTACATGCAATTCATGGTGGTACAGTAACTCGTATTGGTTCTGACGGCTACATAGGTTGGTATGTAGTTACTCACTCACGAGACGGCTATGATATTGTCTATCAAGAAGCTTTCTCAAGTCGTGGAAACATCAAAGTTAGTCAAGGACAAACAATTAAGACTGGCGATGTAATTGGAATACGTGATACTAGTCACGTCCATATCGGGGTTACGAAAAAATCTTGGTATGAGGGTTACACAAAAGGTCATTCTTTTGACCCTAACTGGGCTTGGCTAGATCCTTTGAAGTTAATTAAAGAGGGCGGTCAGAAGGGCGATAAAGATAGTACCTCGACTACTTACGAAGATGAAAGCCCACAGCCTAGATTTAACATCACTAGTGTTAATGGTGGCAAAGATTACATTGAAGATGCTGACTTAATACGGCAGTTTGGCGTGATCGAAGGAACGAAGATTTTTGATGACTTGCAAGACCCAGCTCAAATCAAACAAATGGGCGAAAAATGGCTTGCTAATGAAAAACAGCACGTCACTAAGAACTCATTTGAAGTTTCAGCATTAGAATTGCCTGAATTTGATCGGTTTAGAGTTGGAGATTCATATCAGTTCATCAACCCTCAGGTATCCAAAACAGCCCAATTACTTCAAGTAGTCGAAAAAGATATTGATTTCGCTCACGAAAGAAATAGTAGCTTAAAGATCGCTGATGTTGCTAAGAGTTTAACTGACTATCAAATTGAGGACGGTAAGAAAATTAATGCTCGTTTTCAATCTATTCAAAAAACTTTAGCCCAGCAATCTTTGACCATTGCTAACCTTTCATCTGGTGCAATGAGTGCTGAAAGTAGCAATAATCAGACTAATCAAAAAGTTCAACATGTTTCAGAACAGAGCGATTTTAATGCTCAAAAAATCAAAGATGAGCTAGATAAGCACTTAACAGACTATGCCAAGGTTAAGAAGTTCTTAGATGAAGAACTACCAATTAAGTATGCGACAGTTGAACAACTGAAATCATTTGGAGAAAGGCTGGATAAATTAGAACAGAAGGGAGAAAGTGATGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d280f27392ee97eab59873a48d086639f0fef34b4bc02d7ecdd227f5553e1e33
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3396
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50