Protein

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Genbank accession
ANM47011.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAIYKKGDIEVSINERGVDRGNVNANFYTEDKSTSAINIYVNWDKHPLNLNNVNMQLQLDLFHSDGSIFMNEPLNIIYAENGLVQYKISDNVIKHVGKVNAKLFLKNDTQSVHVADFGFNIKDSGVTDAVDKEITVNLVDDSVRRIIQENAIELLGDGFKDDVSVELKNYVNDNAETFKGPKGDEGKQGQRGPQGVKGDTGEQGLQGPQGIQGERGLRGEQGPQGPRGMTGAKGDKGEDGQNANYEIVESMIDSNIEPIQNNVSKVEKNMDKVYKELTSSVNIYVRPDGHDETGDGSTNNPFKTIQKAVNTIPKLIEKDHFVKVAEGEYNEDVTIKGISGSAVWISREDGIVDPSTTRPNVKVKSITYYDCNAYCKIESVEQLNAGEIGGQGFIRFSRCSYGTVHACLMDDGTITKPTLVWDRSGGGFNSCHFNNQRQCANSMNGSAIRCDSTNTHGSIKSDIGVVVQAAEIFYNGTIEWIEGATRPESYVQGGMINKYATEIDLTTKNGWNSYSADYRPRALRMPDGTVHLYGLIKDGTPGSGSVAFTLPKGYTPKTKGIYGGFVSDGSIGKILIDVSGNFAVESMTGQYISLSGISFYAGF
Physico‐chemical
properties
protein length:603 AA
molecular weight: 65784,47510 Da
isoelectric point:5,18505
aromaticity:0,08126
hydropathy:-0,49867

Domains

Domains [InterPro]
DC_0885
STR
1–384
DC_0885 DC_1902
IPR018913
ATT
6–137
IPR018913 IPR050149 G3DSA:3.30.1910.20
G3DSA:2.60.40.3350
ATT
8–127
G3DSA:2.60.40.3350 IPR008160 IPR011050
ANM47011.1
1 603
Architecture
ATT
STR
RBD
ATT 1-137 | STR 138-454 | RBD 500-603
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANM47011.1
1 603
Domain Start End Length (AA) Confidence
N-terminal 1 297 297 0,9351
Central domain 298 496 200 0,9715
C-terminal 497 603 106 0,9939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-297
Central
298-496
C-terminal
497-603

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauS_IMEP5
[NCBI] 		1852565 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANM47011.1 [NCBI]
Genbank nucleotide accession
KX156762.1 [NCBI]
CDS location
range 17959 -> 19770
strand -
CDS
ATGGCTATATATAAAAAAGGAGACATAGAAGTATCGATTAATGAACGTGGTGTTGATAGGGGTAATGTGAACGCTAATTTTTACACAGAAGATAAATCAACATCAGCAATTAATATATATGTCAACTGGGATAAACACCCTTTAAACTTAAACAATGTAAATATGCAACTACAATTAGACCTATTCCATAGCGATGGGTCTATTTTTATGAACGAACCTTTAAATATTATCTATGCAGAAAATGGTTTAGTTCAGTATAAGATTAGTGATAATGTGATAAAACACGTTGGTAAAGTTAACGCTAAACTGTTTCTTAAGAATGATACACAATCTGTTCATGTTGCAGATTTTGGTTTCAACATTAAAGATAGTGGCGTTACAGATGCAGTAGACAAAGAAATAACGGTTAATCTAGTAGACGACAGTGTAAGACGTATCATTCAAGAAAACGCTATCGAGTTATTAGGGGATGGCTTTAAAGATGATGTATCAGTAGAGTTAAAAAACTACGTAAACGATAACGCTGAAACTTTTAAAGGTCCTAAAGGTGATGAAGGTAAGCAAGGTCAACGTGGACCGCAAGGTGTCAAAGGTGATACTGGAGAACAAGGTTTACAAGGTCCACAAGGTATACAAGGAGAAAGAGGTTTACGTGGCGAACAAGGACCACAAGGACCACGTGGTATGACTGGTGCTAAAGGTGATAAAGGGGAAGACGGTCAAAACGCAAATTATGAAATCGTAGAAAGTATGATTGATTCGAATATAGAACCAATTCAAAACAATGTTTCAAAAGTAGAAAAAAACATGGATAAGGTTTATAAAGAATTAACAAGCTCTGTTAATATATATGTAAGACCTGATGGTCATGATGAAACAGGTGATGGAAGTACAAATAACCCGTTTAAAACAATACAAAAAGCTGTTAACACCATACCTAAATTAATTGAAAAAGACCACTTTGTAAAAGTAGCAGAAGGTGAATATAATGAAGATGTTACGATAAAAGGTATTTCAGGATCAGCAGTATGGATATCTAGAGAAGATGGAATTGTAGACCCCTCCACAACACGACCTAATGTAAAAGTAAAATCAATAACATATTATGATTGTAATGCTTATTGCAAAATTGAAAGTGTTGAACAGTTAAACGCTGGAGAAATAGGTGGACAAGGATTCATAAGATTTAGTAGATGTTCTTATGGAACAGTCCACGCTTGTTTAATGGATGATGGAACAATAACAAAACCAACATTAGTTTGGGATAGGTCAGGTGGAGGTTTCAATTCATGTCATTTTAACAATCAAAGGCAGTGTGCTAACTCTATGAATGGCTCGGCTATTAGATGTGATTCGACAAACACTCATGGTTCTATAAAATCAGATATTGGTGTTGTAGTTCAAGCGGCAGAAATTTTCTATAACGGTACTATCGAATGGATTGAAGGCGCTACTCGTCCTGAGAGTTATGTACAAGGTGGAATGATTAATAAATATGCTACTGAAATTGATTTAACTACTAAAAATGGTTGGAATAGTTATTCCGCAGATTATAGACCAAGAGCATTAAGAATGCCCGATGGTACAGTTCATTTATATGGGCTAATAAAAGATGGGACGCCAGGTAGTGGGTCAGTAGCTTTTACACTACCTAAAGGTTATACACCTAAAACAAAAGGTATATATGGTGGTTTTGTTTCTGATGGTAGTATAGGGAAAATATTAATTGATGTTTCTGGTAATTTTGCAGTAGAAAGTATGACAGGTCAATATATTAGTTTATCTGGAATCAGTTTTTATGCTGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3bfe8fc272362492a9365bf8016120ec76fde50163bf5abe78a4ce65ed082450
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence analysis of a novel virulent Siphoviridae phage against Staphylococcus aureus isolated from dairy cows with mastitis in Xinjiang, China Zhang,X., Zhang,Q., Sun,Q., Xing,S., Gang,Q. and Tong,Y. 2017-03-15 — GenBank