Protein

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Genbank accession
QOC56966.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAVVGIPGWIGTSAVAETGQRWMTAASRELRLGNPSWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSRDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGWAAGAIGASDGGVCIQNDIGGRLRINNGGAIAGGGGGGGGYSQANNWAGKYVCGGGGGRPFGLGGNNGARWPGGNASLTAPGAGGNTGQYWAGGGGEVGQPGQYANPGNGYSTPPTNPGAAVAGSAPTWQNVGAVYGSRV
Physico‐chemical
properties
protein length:260 AA
molecular weight: 26406,74090 Da
isoelectric point:8,48960
aromaticity:0,10385
hydropathy:-0,28115

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–137
DC_2135
QOC56966.1
1 260
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-137 | RBD 138-260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vb_EcoM_bov10K1
[NCBI] 		2763520 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOC56966.1 [NCBI]
Genbank nucleotide accession
MT884007.2 [NCBI]
CDS location
range 156191 -> 156973
strand +
CDS
ATGGCAGTAGTAGGAATTCCTGGTTGGATTGGGACTTCAGCCGTCGCTGAAACAGGCCAACGTTGGATGACAGCAGCTTCTAGAGAATTGCGTCTTGGTAACCCGTCTTGGATGTCCCAATTCGCGGGCCGCTCAAGAGAAATTATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACTGGAGATTTAGTATCATATTCTAGAGACGTTCCTTTATTCTTCATGTACGGAGATACACCGAATGAATATGTTCAATTGAATATACACGGCGTAACGATGTATGGTCGCGGCGGGAATGGTTGGGCTGCTGGAGCGATTGGAGCGTCTGACGGTGGTGTATGTATCCAAAATGATATAGGTGGACGCCTACGAATTAATAATGGGGGAGCTATTGCTGGAGGCGGCGGCGGTGGCGGTGGATATTCGCAAGCCAATAACTGGGCAGGAAAATATGTATGTGGAGGCGGCGGTGGTCGTCCATTTGGTTTAGGCGGAAATAATGGTGCTCGATGGCCTGGTGGAAATGCTAGCTTAACAGCACCTGGTGCTGGTGGTAATACTGGCCAATATTGGGCTGGCGGTGGAGGTGAAGTTGGTCAACCAGGTCAATATGCTAATCCAGGTAATGGTTATTCAACACCTCCGACAAATCCTGGTGCTGCTGTAGCAGGATCGGCTCCAACGTGGCAAAACGTTGGAGCCGTATACGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9855b465bc069353f9b5c2372809611d328f82b8fe5e5ac3d6f5316af5463111
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomes of novel bovine T4, rv5-like and Dillon viruses effective against Escherichia coli O157 Svab,D., Falgenhauer,L., Chakraborty,T. and Toth,I. 1975-07-29 — GenBank