Protein

View in Explore
Genbank accession
YP_010079443.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNTHNAFGTNPGIGNCCGDLNDPIVDKLIGNAYYVVKFVAMRMPFIKTLNDNIDDLIALAGSLEGLNDLADKLPELMALQTELQKLIVLYNNLADLVLVADNMTQILTVHDNLPQIQTIVDNLTQIQTVVTNIASIVSVASNIAAVNNVNSNMPAVLNVNTNMAAVNNVSTNMTDVRSVANNMSSVTNVSNNMAEILAVYNLLPDVQLIVQNLQDMLDFANNLAASDGSEKVGFIDAGTGAVARTVEDRLRDHVSVRGFGALGLGSVDETPLFTAALASPASRIYVPEGTYILEDLKIPAGKKLYGPGTLKWKNAATKTMITFTGARGSLEGLNLDGNRENQTQNLIMVETLTAPSCSMLNCKAFNGRYKLFRTDVSGSPFMQVMGNDVRDWGDISGCNVFDFRSSYALATNNRIQNVGDGHCFRIGVYDSDPAIPVIGTVISNNVMKDTIHVGVCIELYAQHVTVSGNSFDNLEQGVKIESQGNTAFDLSVTGNVFKNLTAEAASNNLSGTRVVFSGNTLLNCGSTALGGPGVTVSNNIFRNCGAAARPSIEANSASLNAQILGNLVFDSPYDGILVGGAGSICLGNRVIGSARRGISAAADSLFVHDNHTTGGTHGIVTSSACTNLHLVNNKATGATTANYSITLGAGTYMDQSNIGWTGFSGAFSPASGVLTLNVAMPVLAIKTDTEGGAASGDINTITQPNVTPGMLLMLRPNTASRVTTVKHGTGNIRLAGGADFVMNTSRGQLTLMWSGDAWEEISRSANT
Physico‐chemical
properties
protein length:767 AA
molecular weight: 80855,45930 Da
isoelectric point:5,09467
aromaticity:0,05606
hydropathy:0,06545

Domains

Domains [InterPro]
DC_0265
STR
1–114
DC_0265 IPR012334 IPR057996
DC_2184
STR
210–767
DC_2184
IPR011050
STR
253–546
IPR011050 IPR006626 IPR006626 IPR006626
IPR006626
Unmapped
405–428
IPR006626 IPR006626 IPR006626 IPR011050
IPR006626
Unmapped
511–538
IPR006626
YP_010079443.1
1 767
Architecture
STR
STR
STR 1-114 | STR 204-767
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010079443.1
1 767
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9283
Central domain 271 664 395 0,9949
C-terminal 665 767 102 0,9863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-664
C-terminal
665-767

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyP_19-32_Axy11
[NCBI] 		2591042 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010079443.1 [NCBI]
Genbank nucleotide accession
NC_054972.1 [NCBI]
CDS location
range 65011 -> 67314
strand -
CDS
ATGAACACTCACAACGCTTTCGGCACGAATCCCGGTATCGGGAACTGCTGCGGCGATCTGAATGACCCCATCGTAGATAAGCTGATTGGCAATGCTTACTACGTGGTGAAGTTCGTCGCCATGCGTATGCCTTTCATCAAGACCCTGAATGACAACATCGATGATCTCATTGCTCTGGCTGGTTCTCTGGAGGGCTTGAATGATCTGGCGGATAAGTTGCCGGAACTGATGGCTCTTCAAACCGAGCTTCAGAAGCTGATCGTGCTGTACAACAACCTGGCTGATCTGGTTCTGGTTGCTGACAACATGACCCAGATTCTGACGGTCCACGATAACCTGCCGCAGATTCAGACCATCGTGGACAATCTGACTCAGATTCAAACGGTGGTGACCAATATCGCCAGCATTGTCTCGGTTGCAAGCAACATCGCTGCCGTAAACAATGTCAACAGCAATATGCCGGCAGTGTTGAACGTCAACACCAACATGGCTGCGGTGAACAACGTCTCCACGAACATGACGGACGTTCGTTCTGTGGCGAACAACATGTCGTCTGTGACCAATGTGTCCAACAACATGGCTGAAATTCTGGCCGTGTACAACCTGCTGCCTGACGTTCAGTTGATCGTGCAGAACCTGCAAGACATGCTGGATTTCGCCAACAATCTGGCTGCTTCCGACGGTAGCGAGAAGGTGGGATTCATCGACGCAGGTACGGGTGCCGTTGCACGCACGGTCGAAGACCGTTTGCGTGATCACGTCAGCGTTCGCGGCTTCGGTGCTCTTGGCCTTGGTTCCGTTGATGAGACGCCTCTGTTCACCGCTGCTTTGGCATCTCCGGCTTCCCGTATTTACGTACCGGAAGGGACGTATATCCTGGAAGACCTGAAGATTCCGGCTGGCAAGAAGCTGTATGGCCCCGGTACGCTGAAGTGGAAAAATGCTGCTACCAAGACCATGATCACCTTCACTGGTGCTCGCGGTTCCCTGGAAGGGCTGAATCTGGACGGCAACCGTGAAAACCAGACGCAGAACCTCATCATGGTGGAGACGCTGACTGCCCCCAGTTGCTCCATGCTGAACTGCAAAGCTTTCAACGGCCGCTACAAGCTGTTCCGTACTGACGTGTCGGGAAGTCCGTTCATGCAGGTGATGGGCAATGATGTCCGTGACTGGGGCGACATTTCCGGTTGCAACGTCTTCGACTTCCGTTCGTCCTATGCGCTGGCGACCAACAACCGTATTCAGAATGTGGGGGATGGTCACTGCTTCCGCATCGGTGTGTACGATTCCGACCCCGCCATTCCGGTGATCGGTACGGTGATCAGCAACAACGTCATGAAGGACACGATTCATGTTGGTGTGTGCATCGAACTTTATGCACAGCATGTGACGGTTTCCGGCAACTCGTTCGACAATCTGGAACAGGGTGTCAAGATCGAGAGCCAAGGAAACACTGCCTTCGATCTGTCGGTGACCGGCAACGTTTTCAAGAATCTGACGGCAGAGGCGGCCTCCAACAACCTGTCCGGAACTCGTGTGGTGTTCTCCGGCAATACGCTGCTCAACTGCGGTTCCACTGCTTTGGGCGGTCCGGGCGTTACGGTGTCGAACAACATTTTCCGCAACTGCGGGGCTGCTGCTCGTCCTTCCATCGAGGCCAATTCGGCTTCGCTGAATGCTCAGATTCTGGGGAATTTGGTGTTTGACTCCCCCTATGATGGCATTCTGGTTGGTGGTGCTGGTTCCATTTGCTTGGGCAACCGAGTCATTGGTTCGGCACGTCGTGGGATTTCGGCTGCGGCTGATTCCCTTTTCGTGCATGACAACCACACCACTGGCGGTACGCACGGTATCGTTACCTCGTCTGCTTGCACCAATTTGCACTTGGTGAACAACAAGGCGACGGGGGCCACTACGGCGAACTACTCCATCACCCTGGGTGCTGGCACCTACATGGATCAATCCAACATCGGCTGGACTGGTTTCTCTGGTGCGTTCTCCCCGGCTTCCGGTGTGCTGACCCTGAATGTGGCTATGCCTGTTCTTGCCATCAAGACCGATACGGAAGGCGGTGCGGCATCGGGTGACATCAACACCATCACCCAGCCCAACGTGACTCCGGGCATGTTGCTGATGCTGCGTCCCAACACGGCTTCCCGTGTGACGACGGTGAAGCACGGTACGGGTAATATCCGGTTGGCTGGTGGGGCAGACTTCGTGATGAATACTTCCCGTGGTCAGCTCACCCTGATGTGGTCCGGTGATGCCTGGGAAGAGATTTCCCGCTCGGCTAACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
33c435001b4429ca3ea1d619ebd5d41ce191fc1cb1c00368e8da299b3b5b8c4d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank