Protein

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Genbank accession
AGH06929.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MALSKISGNQISTSTEAIITTLTFLNSNSVFRLPAGTQAQRPSGVSIGTLRFNTDTDAAEIYKADDGSGSAGWAAVSGGGPSLGEDSVIRTNQNTISENITVGPTAGDEFANGMSAGPITIANGFTITIENGGAWSVR
Physico‐chemical
properties
protein length:138 AA
molecular weight: 14042,24110 Da
isoelectric point:4,42210
aromaticity:0,05797
hydropathy:-0,08913

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2 R9_2006
[NCBI] 		869663 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH06929.1 [NCBI]
Genbank nucleotide accession
HQ317291 [NCBI]
CDS location
range 26573 -> 26989
strand +
CDS
ATGGCACTATCAAAGATTAGTGGAAATCAGATTTCCACGTCAACCGAAGCAATCATCACAACTCTCACATTCCTGAACTCTAACTCTGTGTTTAGATTACCAGCAGGTACTCAAGCACAGAGACCTTCTGGCGTTTCTATTGGTACGCTTCGTTTCAACACAGATACTGACGCTGCTGAAATCTATAAGGCAGACGATGGATCTGGTAGTGCAGGTTGGGCAGCAGTTTCTGGTGGTGGACCATCTCTTGGTGAAGATAGTGTTATTAGAACGAATCAAAATACTATCTCCGAAAATATTACAGTAGGTCCTACGGCAGGCGATGAATTTGCCAACGGTATGAGTGCAGGTCCTATTACGATTGCAAACGGATTTACGATTACTATCGAAAATGGTGGTGCATGGAGTGTTAGATAA

Tertiary structure

PDB ID
075603e359e8b05ef45d6ae12a83e9c39209a82b0fc6f337e99394879e952f3b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6438
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-RIM2 isolate R9_2006 Henn,M.R., Marston,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2021-02-24 — GenBank