Protein

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Genbank accession
XNZ85303.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MHFRLFNKPAAFDIESGKARMWIDGVYEDYVAGEPYEGRVQIHGSVGLMKVEVLDSNLPPGASVFIDQITKEVVVKWLKYSPPVNEVRGVPNGSFETQDFWELVGPGTPAHIESGWSPDGKGNLTYRDNKGEYKVRGAWAPVSSNTRQIEIRGKVEHGKSSKGNAACAVGLAWYDNDRQLVREDIGSFVTNGGKGRWYDTMGAYSANNPAIRFVRPMVVFNRKKQNHPIHAGQITWDHVYEDGYLEDETKFVEVRVTDSTFNVAVHRGIIEENNIWLTSALYPTMVVEGLDVSQSLVGVTTGTAKNGNPIDNMTPSVGIRSVVFKNNVNEVNYSGDNLTPSIDIKRVYFKTNVVEMPYGVDRMSVEPRVKSVVFWRNAVNTDMKIDNFTPSIAIKKVTLK
Physico‐chemical
properties
protein length:400 AA
molecular weight: 44698,97570 Da
isoelectric point:6,73164
aromaticity:0,10000
hydropathy:-0,39050

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85303.1
1 400
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,4893
Central domain 180 389 211 0,2156
C-terminal 390 400 10 0,2933
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-389
C-terminal
390-400

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage S28phi1
[NCBI] 		3162002 Viruses > unclassified bacterial viruses >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85303.1 [NCBI]
Genbank nucleotide accession
PQ492158.1 [NCBI]
CDS location
range 29276 -> 30478
strand -
CDS
ATGCACTTCCGTCTATTCAACAAGCCCGCTGCCTTCGACATCGAGTCGGGCAAGGCCCGTATGTGGATCGACGGTGTGTACGAGGACTACGTTGCGGGCGAACCCTACGAGGGCCGCGTGCAGATTCACGGCTCGGTGGGACTGATGAAGGTCGAGGTTCTCGACAGCAATCTCCCACCGGGCGCGTCTGTGTTCATCGACCAGATCACCAAAGAAGTAGTGGTGAAGTGGTTGAAGTACAGCCCGCCTGTGAATGAGGTCCGTGGCGTACCCAACGGTTCCTTCGAGACTCAGGATTTCTGGGAACTCGTTGGACCCGGTACGCCCGCACACATCGAGTCTGGGTGGTCGCCGGATGGCAAGGGAAACCTCACCTACCGTGACAACAAGGGCGAGTACAAGGTTCGAGGCGCATGGGCACCCGTGTCCAGTAACACGCGGCAGATTGAGATTCGTGGCAAGGTCGAGCACGGCAAGTCCTCTAAGGGCAACGCAGCGTGCGCAGTCGGCCTTGCGTGGTACGACAACGATCGTCAGCTGGTGCGCGAGGACATCGGCTCCTTTGTGACCAACGGCGGTAAGGGTCGCTGGTACGACACCATGGGCGCCTACTCGGCCAACAACCCGGCCATCCGCTTCGTACGGCCAATGGTCGTGTTCAACCGAAAGAAGCAAAACCACCCGATCCATGCAGGACAGATCACATGGGATCACGTCTACGAAGATGGGTACCTTGAGGACGAGACGAAGTTCGTTGAGGTCCGTGTTACAGACTCCACGTTCAACGTCGCTGTCCATCGTGGCATCATCGAAGAGAACAACATCTGGCTCACGTCTGCCCTGTATCCTACCATGGTTGTGGAAGGTCTGGACGTATCGCAGAGTCTGGTGGGTGTGACCACTGGTACTGCCAAGAATGGAAACCCCATCGACAACATGACCCCATCGGTCGGTATCCGCTCCGTGGTCTTCAAGAACAACGTCAACGAGGTCAACTACTCCGGCGACAACCTGACGCCGAGCATCGACATCAAGCGCGTGTACTTCAAGACCAACGTGGTCGAGATGCCGTATGGCGTAGACCGTATGTCTGTTGAGCCGCGTGTCAAGTCGGTTGTGTTCTGGCGCAACGCTGTGAACACTGACATGAAGATTGACAACTTCACCCCATCCATCGCCATCAAGAAGGTGACACTGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5101fdbefe23884147a2df01cdfe9218421236602ff5518b6daa594fe44670d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6559
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Whitson,K.L. and Pride,D. — — GenBank