Protein

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Genbank accession
XOF08944.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYGIWTQPVGPGPATPAPLFIDSGSTFPQFKNSIRGSFNFNGAGRSFPISGWDGSGQIVIVPTGSLCWQWEVPPNLVPDVYCVNNIYVENTSSFRVTLNQNPGGNPLFDCGFNVYQIWPRADRNYGITFSNTADYFSISDAGVVGQCIWAWQGVINNALQIPNIGGFNMTNAVVFANWSDGGLGLSYTSDDRVIRVYQNRPYVNGNTNEGGSVFARIAVFCNGAGVPEHNGGLNIYSPGTTQCVFSTNRTPFTVDTFIGSGGGNTGMAYPMIPLTSGIGAIKGQGSGWRYQQMRSHTMSGSSIGTGYGRYLFQWNQNYDLGADTVVNLSVPVINAAKVFAGL
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36857,74950 Da
isoelectric point:6,07117
aromaticity:0,13120
hydropathy:-0,09009

Domains

Domains [InterPro]
DC_1434
ATT
1–40
DC_1434
IPR045604
STR
22–316
IPR045604
XOF08944.1
1 343
Architecture
ATT
STR
ATT 1-40 | STR 41-316 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOF08944.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 91 91 0,0043
Central domain 92 290 200 0,0206
C-terminal 291 343 52 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-91
Central
92-290
C-terminal
291-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ShigP1
[NCBI] 		3390906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOF08944.1 [NCBI]
Genbank nucleotide accession
PQ818763 [NCBI]
CDS location
range 36550 -> 37581
strand +
CDS
ATGGCATATGGAATATGGACACAACCAGTAGGGCCGGGGCCAGCAACCCCCGCTCCCTTGTTTATTGATAGCGGAAGTACTTTCCCTCAGTTCAAGAATAGCATAAGAGGGAGTTTTAACTTCAATGGAGCTGGGAGATCTTTCCCTATTAGTGGATGGGATGGTAGTGGTCAGATAGTTATTGTTCCCACTGGTTCTCTATGCTGGCAATGGGAAGTCCCTCCTAACTTAGTCCCTGATGTTTATTGTGTAAATAACATCTATGTAGAAAATACCTCATCTTTTAGGGTGACTCTGAACCAGAATCCCGGCGGCAATCCTTTGTTTGACTGTGGATTCAACGTCTACCAGATTTGGCCTAGAGCTGATAGAAACTATGGGATAACTTTCTCAAATACAGCAGACTACTTTTCCATATCAGATGCTGGGGTTGTTGGTCAATGCATTTGGGCTTGGCAGGGGGTCATAAACAATGCCCTTCAGATACCAAATATCGGTGGGTTCAATATGACCAATGCTGTTGTATTTGCTAATTGGTCTGATGGAGGACTTGGGCTGTCTTATACCTCTGATGATAGAGTTATTCGTGTCTACCAGAACAGACCTTACGTAAACGGCAACACTAATGAGGGTGGTTCTGTGTTTGCTAGAATTGCAGTATTCTGCAATGGGGCAGGTGTTCCGGAACATAATGGAGGTTTAAATATCTACTCTCCGGGAACCACTCAATGTGTATTTTCTACTAACAGAACACCTTTTACTGTGGATACTTTTATAGGCTCAGGAGGTGGTAACACTGGAATGGCGTACCCTATGATACCTCTTACTTCTGGAATAGGTGCAATAAAAGGCCAAGGTAGTGGGTGGAGATACCAGCAAATGAGATCTCACACAATGAGTGGCTCTAGCATAGGAACTGGTTATGGAAGGTACTTATTTCAGTGGAATCAAAATTACGACCTAGGGGCTGACACTGTTGTTAACTTATCAGTTCCTGTAATAAACGCAGCTAAGGTTTTTGCTGGACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7296288506bb86e83035e83d909edd7ce3fa2335462bef59800746b6ac4dd22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50