Protein

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Genbank accession
AUR90862.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MASINLKGYLREPLGETSGGNKIVFTHVSTTGEVIAGSRTSYTVEANGYYDIDIEYGNVAIETSDLNSRSWQYHGTTTINQDTTATTLPTLLNSFVPPTNDQIILFQDLVKDAEDARDASEASAVRSEAAAQDSINNSILMNEQQARAKNATNNNHFDASGMVNTGKHETKNAIVNEGIAAYLNSGSNVAANTILIGASAGASLSGTSKTGYSVNHIAGSVINAILENNQFKFELPPAPDGTQVSDSTGDARGSGKANLDLKVDVDPKYGDVPTGSDAEILREAVSRAFEGYTKNGDMRDGVTSWTAQGGAILSPVADGVELITSASSMGMTGIIAPAAFGAGDEVEVTLVANIPNGLTCVFGVYDSTNGTRTTVATGTGKVEVYKTTISFPNADSGVNIRLYHSGGASVRTITVHNLSLRPATEEVVTHRVDLAAWEYYEEELTGRVEIMECVGSTSTTFGTTSVPTVLSTRKLSYFQQYDGQFPEVTANPDFINDRFVCVVWDDLTEPQKREIAAYMGEKLFMGVNGFPVNGRLRARTIRGAGNGDWTNIDSNTATSNWLQPTSNLLIKPQGKKDASPQASGAFPTYGTQLTVQTSEVDTHKGVFQALSSTNIPDESAAYQGRCFLYVVATVPRACKAAYVKGLNEFGTGMLQSKRGAGFSEVWYASNAVEVNTLQDTFTMLAPNTGAIGQTSGHPDGIFYDGIEAGGLNGIIDWRLPAVANDSPEESAKVEAKVENKTYRGLEELVWTFAGTSTEVGLATGAILDGGIPKVGLTEGSSIFIETSVGNYEERTVTGLNYSLGAVNFTPAATRIAGGHYIVSGVINLSVSGEFATQMVVADPANILLTDALKDGWLGTWCPVIPDGANHDFPMSRKDVGSASVTTITTANNGDTWATNPRSIHATTNDDNASWSTGLIVIYPYKAWAKPTKKSSNKPVYNGKAGLMDVFSTSSSVAEHGVHLQESLTGNIGKSTINPYRYSNKLTAFNIHGSSGVITDNVDYSPEHTPLLLAAPSNDSPAVKVLPYQISNNGQGSIGYQANELTWGTPTYLGVDETNTAWVAGEFYRVQDSTLGTRKFYRCEVSTSLPMNSASFIKQADGSIKYHTTGVIYFTDMGLPQGWGDDDKVKVTADGSDTFVDLNGNTNLSVVHELAIPCTWTSNHARAGSQVEGVDL
Physico‐chemical
properties
protein length:1175 AA
molecular weight: 125070,03060 Da
isoelectric point:4,84538
aromaticity:0,08085
hydropathy:-0,24757

Domains

Domains [InterPro]
DC_1387
STR
26–1175
DC_1387
AUR90862.1
1 1175
Architecture
STR
STR 26-1175
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR90862.1
1 1175
Domain Start End Length (AA) Confidence
N-terminal 1 420 420 0,6667
Central domain 421 619 200 0,5514
C-terminal 620 1175 555 0,7020
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-420
Central
421-619
C-terminal
620-1175

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.151.O._10N.222.46.B1
[NCBI] 		1881430 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR90862.1 [NCBI]
Genbank nucleotide accession
MG592520 [NCBI]
CDS location
range 20912 -> 24439
strand +
CDS
ATGGCGAGTATTAATTTAAAAGGCTATCTACGCGAGCCGCTAGGGGAAACTTCCGGCGGCAATAAGATCGTATTTACGCACGTATCAACAACGGGCGAAGTTATCGCGGGATCTAGAACGTCTTACACGGTAGAAGCTAACGGCTATTACGATATTGATATCGAATACGGCAACGTTGCGATAGAGACAAGCGATCTAAATTCGCGTTCTTGGCAGTACCACGGCACAACAACGATCAACCAAGACACAACAGCAACAACGCTGCCAACGCTGTTAAATTCATTTGTACCGCCAACCAATGACCAAATCATTTTGTTTCAAGACTTGGTTAAAGATGCCGAAGACGCCCGCGATGCTTCCGAGGCTTCAGCGGTTAGATCTGAAGCGGCGGCGCAAGACTCAATTAATAACTCTATCTTAATGAATGAGCAGCAAGCGCGAGCTAAGAACGCAACCAACAATAACCACTTTGATGCTAGTGGGATGGTTAATACTGGTAAGCATGAAACCAAGAATGCCATTGTAAATGAAGGCATTGCTGCTTATTTGAATTCAGGTAGTAACGTAGCTGCAAACACTATATTAATTGGTGCATCAGCGGGAGCTTCTCTTTCAGGTACGTCGAAAACAGGGTATTCCGTAAACCACATTGCAGGTTCTGTAATAAATGCAATCCTAGAAAATAATCAGTTTAAGTTTGAACTGCCACCCGCCCCAGACGGCACCCAAGTCAGCGACTCAACAGGTGATGCTCGTGGTTCAGGTAAAGCTAACCTAGACCTAAAGGTAGATGTTGACCCTAAGTATGGTGATGTTCCAACTGGTTCAGATGCAGAGATTCTCCGTGAGGCGGTAAGTCGAGCGTTTGAGGGTTACACTAAAAACGGTGACATGCGTGATGGGGTAACTAGTTGGACTGCGCAAGGAGGTGCAATATTGAGTCCGGTAGCGGATGGGGTTGAGCTAATTACTTCAGCATCAAGCATGGGCATGACTGGTATTATAGCCCCTGCCGCCTTTGGCGCGGGTGATGAGGTAGAGGTGACGTTAGTTGCAAACATACCTAACGGGCTAACTTGTGTTTTTGGTGTTTACGACTCAACCAATGGTACGCGCACCACCGTAGCAACTGGTACAGGTAAAGTTGAGGTGTATAAAACAACTATCAGCTTCCCGAATGCGGACAGTGGTGTAAATATACGCCTATACCATTCTGGGGGTGCGTCAGTTAGAACAATCACAGTGCATAACCTTTCGTTACGCCCAGCCACTGAAGAAGTAGTAACACATCGTGTCGACTTAGCAGCGTGGGAATACTACGAAGAAGAGCTAACTGGCCGCGTTGAGATTATGGAGTGCGTTGGTTCAACCTCTACCACTTTCGGCACCACCAGTGTTCCTACCGTTCTGTCTACTCGCAAGCTTTCTTACTTCCAACAGTATGACGGACAATTCCCTGAAGTTACCGCGAACCCAGACTTTATTAATGATCGATTTGTCTGCGTTGTTTGGGATGACTTAACTGAACCACAGAAGCGTGAGATTGCCGCTTACATGGGTGAGAAGCTGTTCATGGGTGTGAATGGGTTCCCTGTTAATGGTCGTTTACGTGCGCGTACTATTCGTGGTGCGGGTAATGGTGATTGGACTAATATTGACAGCAACACTGCGACTTCAAATTGGTTGCAGCCTACATCGAATCTTTTAATAAAGCCGCAAGGGAAAAAAGATGCATCACCACAAGCCAGTGGAGCCTTTCCAACCTACGGAACGCAGCTAACAGTGCAAACTAGTGAGGTAGACACTCATAAAGGGGTCTTCCAAGCACTGTCAAGCACCAACATCCCCGACGAGAGTGCGGCATACCAAGGCCGTTGCTTCCTGTATGTAGTAGCTACCGTACCTAGAGCATGTAAAGCTGCCTACGTTAAAGGTTTAAATGAGTTCGGCACAGGCATGCTTCAGTCAAAGCGTGGAGCGGGATTCTCAGAAGTGTGGTACGCAAGTAATGCGGTTGAAGTTAATACCCTACAAGACACGTTCACCATGCTTGCACCTAATACTGGTGCTATTGGTCAAACTTCAGGACACCCAGACGGTATTTTCTACGATGGCATCGAAGCAGGCGGTTTGAACGGGATTATTGATTGGCGTTTACCTGCCGTTGCTAATGATTCACCAGAAGAATCCGCTAAGGTGGAAGCTAAGGTTGAGAATAAGACTTATCGTGGTTTGGAGGAGTTGGTTTGGACATTCGCGGGGACATCAACAGAGGTCGGTCTAGCAACAGGTGCTATTTTAGATGGTGGGATTCCTAAAGTTGGATTAACTGAAGGGTCTAGTATATTCATTGAAACATCCGTTGGTAATTACGAAGAAAGAACAGTAACTGGACTTAACTACTCACTTGGTGCTGTCAACTTCACGCCTGCGGCGACGCGCATTGCAGGTGGTCACTACATTGTAAGTGGGGTAATCAACCTATCAGTATCAGGTGAGTTCGCTACTCAAATGGTTGTTGCTGACCCTGCTAATATCCTGCTAACTGATGCGCTTAAAGATGGTTGGTTGGGAACTTGGTGTCCGGTTATCCCAGATGGGGCAAACCACGACTTCCCAATGTCTAGAAAGGATGTAGGTTCTGCTAGTGTTACAACAATAACAACTGCAAACAATGGTGACACATGGGCTACTAACCCAAGAAGTATTCATGCAACAACGAACGATGATAACGCATCGTGGAGTACGGGTCTTATCGTTATATATCCTTACAAAGCGTGGGCTAAACCAACCAAGAAAAGTAGTAACAAGCCTGTTTACAATGGTAAGGCAGGGTTGATGGATGTGTTCTCTACTTCCTCATCCGTTGCAGAGCACGGTGTTCACTTACAGGAGTCACTCACAGGTAATATAGGCAAATCAACAATAAATCCATATAGATACTCTAACAAGCTTACTGCGTTTAATATTCATGGCAGCTCTGGAGTTATTACGGATAATGTTGATTATTCGCCTGAGCACACGCCATTATTACTAGCAGCGCCAAGCAACGATTCACCTGCGGTTAAAGTCCTACCTTACCAAATCAGTAACAACGGTCAGGGTAGTATTGGGTATCAGGCTAACGAGTTGACTTGGGGTACGCCTACTTATTTAGGGGTAGATGAAACCAACACTGCGTGGGTAGCAGGAGAGTTTTATAGAGTTCAAGATAGCACCTTAGGCACTCGTAAATTCTACAGATGTGAAGTTAGTACATCCCTGCCGATGAATAGCGCATCATTCATCAAACAAGCTGACGGATCGATTAAATACCACACCACTGGCGTAATATACTTTACGGATATGGGACTACCTCAGGGGTGGGGTGATGATGACAAAGTCAAAGTAACCGCAGACGGTAGCGATACCTTTGTAGACTTGAACGGTAATACTAACCTGTCAGTAGTTCACGAACTGGCTATCCCTTGCACATGGACAAGCAACCATGCGCGAGCGGGTTCTCAGGTCGAAGGTGTGGATTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6a541a94d3538f16747d75a43a1042f0fc240ee691f6f48d07db82f5be3475c0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2852
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank