Protein

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Genbank accession
YAW78467.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MDIRFQGVLRDPLDNPMPNHEIRITALHTDETIKGSTVVFYTDASGAYDFYLLKGFYSLEVLNTAGDEYLLTGNLCLNQSTPQNITLEDALKYSEDIEPEDTVVLDATWSTWWNSLVNASLTSSREHRDQINHDEAHSVDLQETWASGDDTEHGVQRTLEVKAGDARIQEQHRVFDDEFAATGSKVETSQASVHETVNVGTEIDRKKTQTAVTSTNVENEHVGLEIRKDETSTISSGSWSKLKELAANIREVVSFAFGSNQLNKRSSVGTSVEEAYDTLVGSKASSVTHSNDGTTSQHEIIVDEHFIGKTPLSPTVFVDTVTGKVTVYGQLQISELLDGNGDPIDLNPEDGNTIFQVYQYSDSSNGPWEDVVQPYYYWRRENWSINGVVDPGTWSQPYQFRGFDGEPGDPGDTIYIEYQYSPDALVWHSPPLTSGDKWRRERIVTNGVAGPWSAAGQIRGDDGSTVEVRSEYSIDGIYNWHTTLDPADKFERRATFVNNVQDTPWSDPFPIGQGPEGDPGRNGSGWYTLVNATGTWPGDAMATAEFTTAFGRTPVLDDHLTYTNNSNPDLVTASEVKRCNSDFGQSVTWSTPAMVIQGDLIAQGTISGNRLVADTITGNEISSATTIIAGTGSWTAGMNGDDSTGAGIYQNWRFWSGASNPSLAPFRVGRSGNLWASNANINGHITATSGSFTGDIFAETLTLSGVGAQIQSSNYVTGVSGWALFNDGNAEFNNGTFRGTLSAATGNFLGTVYAEKIAGDIVTAISKTNTPVNNNGALFGGVTVSTGRPYVRTLVITLMLSAKATSSGENPPAATATCRLRVNFNGVNYYSNYIESSKGSGSNDPAFSRSQVTIAVPVPANFTGTANCYLSVGQGGGVTELSAPSSNDVWTPLLFKDGGDLS
Physico‐chemical
properties
protein length:902 AA
molecular weight: 97432,22200 Da
isoelectric point:4,53936
aromaticity:0,09313
hydropathy:-0,40976

Domains

Domains [InterPro]
DC_1333
STR
100–721
DC_1333
IPR057549
STR
501–616
IPR057549 IPR015406
DC_1439
RBD
701–902
DC_1439
YAW78467.1
1 902
Architecture
STR
RBD
STR 100-721 | RBD 722-902
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAW78467.1
1 902
Domain Start End Length (AA) Confidence
N-terminal 1 539 539 0,9959
Central domain 540 752 214 0,1904
C-terminal 753 902 149 0,9891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-539
Central
540-752
C-terminal
753-902

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage SA-P
[NCBI] 		3417975 Viruses >
Host Shewanella algae
[NCBI] 		38313 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAW78467.1 [NCBI]
Genbank nucleotide accession
PQ510824.1 [NCBI]
CDS location
range 5194 -> 7902
strand +
CDS
ATGGATATCCGTTTCCAAGGCGTCTTACGAGATCCCTTAGACAATCCAATGCCTAACCACGAAATTCGTATTACGGCGTTGCATACGGATGAAACGATCAAAGGCTCTACTGTTGTGTTCTATACGGATGCCAGCGGAGCTTATGACTTTTATCTGTTGAAAGGATTCTACTCGTTAGAAGTCCTAAATACAGCCGGTGATGAATACCTTCTCACTGGTAATTTGTGTTTGAACCAATCTACCCCTCAGAACATTACCCTTGAAGATGCACTTAAGTATTCCGAAGACATTGAACCAGAAGACACTGTTGTTCTGGATGCAACGTGGAGTACGTGGTGGAATAGTCTAGTTAATGCCTCATTAACTAGCTCTCGTGAGCACAGAGACCAGATTAACCATGACGAAGCACACTCGGTCGACTTACAGGAAACATGGGCCTCAGGGGATGATACAGAGCATGGTGTTCAACGCACTCTTGAAGTAAAAGCAGGAGATGCTAGAATCCAAGAGCAACATCGCGTATTTGATGACGAGTTTGCTGCTACTGGTTCAAAGGTTGAGACATCTCAAGCCTCAGTTCATGAGACTGTGAATGTTGGTACAGAGATCGATCGTAAGAAGACTCAGACAGCTGTGACATCTACTAACGTAGAGAATGAGCATGTTGGCCTAGAGATTCGTAAAGACGAGACATCTACTATCTCATCTGGTTCATGGAGCAAGCTAAAAGAATTGGCGGCTAATATCCGCGAAGTAGTATCTTTTGCTTTTGGTTCAAATCAGTTAAACAAACGATCATCAGTAGGTACGTCTGTTGAAGAGGCCTATGATACCTTAGTTGGTTCAAAAGCTTCTAGTGTAACTCACTCGAATGACGGCACTACTTCTCAACATGAGATCATTGTTGATGAGCATTTCATTGGTAAGACTCCATTGAGTCCTACTGTGTTCGTCGATACAGTTACTGGTAAGGTAACGGTCTATGGTCAGCTACAGATCTCTGAGCTGTTGGATGGGAATGGTGATCCTATTGATCTAAATCCAGAAGATGGTAATACGATCTTTCAGGTGTACCAGTACTCAGATAGTTCAAATGGCCCTTGGGAAGATGTGGTTCAACCATACTACTATTGGCGTCGTGAGAACTGGAGTATTAATGGTGTTGTGGATCCGGGTACTTGGTCTCAGCCGTATCAGTTCCGTGGATTTGATGGCGAACCGGGTGACCCTGGCGACACAATTTATATTGAGTACCAATACTCCCCTGATGCTTTAGTGTGGCATAGCCCTCCTTTAACTTCAGGAGATAAATGGCGTAGAGAACGTATTGTTACAAATGGGGTAGCTGGGCCTTGGTCGGCTGCAGGACAGATTAGAGGGGATGATGGATCAACAGTAGAGGTACGTTCTGAGTATTCTATTGACGGGATTTATAACTGGCATACTACTTTAGATCCTGCTGATAAATTTGAGCGAAGAGCTACTTTTGTTAACAACGTACAAGATACTCCTTGGAGTGACCCTTTTCCTATTGGTCAAGGGCCAGAAGGTGATCCGGGAAGAAATGGTTCAGGATGGTATACTCTTGTTAATGCTACCGGTACTTGGCCGGGAGATGCTATGGCTACTGCAGAGTTTACGACAGCATTTGGGCGTACTCCGGTTTTAGATGATCACCTTACCTATACTAATAACTCAAACCCTGATCTCGTAACTGCTTCCGAAGTTAAGAGGTGCAATTCTGATTTTGGGCAGTCTGTTACATGGTCTACTCCTGCTATGGTTATTCAAGGTGACTTAATTGCTCAAGGCACTATTTCAGGTAATAGGTTAGTCGCAGATACCATTACAGGCAATGAAATTAGTTCTGCTACTACAATTATCGCAGGAACCGGTTCGTGGACAGCAGGCATGAATGGGGACGATTCTACTGGAGCAGGTATTTACCAGAATTGGAGATTTTGGTCAGGCGCTAGTAATCCTAGTTTAGCCCCGTTTCGCGTAGGTAGATCAGGTAACCTTTGGGCTTCTAATGCTAATATTAACGGGCATATTACGGCTACATCTGGTTCATTTACTGGGGATATTTTTGCCGAGACGTTAACTCTTTCTGGGGTTGGTGCTCAAATTCAATCTTCTAACTATGTTACAGGTGTATCTGGCTGGGCTCTCTTTAATGATGGTAATGCAGAGTTTAACAATGGTACGTTCCGAGGTACATTGTCAGCAGCAACCGGTAACTTCTTAGGTACTGTGTATGCTGAGAAGATCGCAGGTGATATCGTTACAGCGATTAGTAAGACGAATACTCCGGTAAACAATAATGGTGCATTATTTGGCGGTGTGACGGTATCAACAGGGCGTCCTTATGTACGTACTTTGGTGATTACTCTAATGCTTTCAGCAAAGGCTACGTCAAGCGGTGAGAACCCGCCAGCAGCTACTGCGACTTGTCGTTTGCGTGTAAACTTTAATGGAGTAAACTATTACAGTAACTACATCGAGAGTTCTAAAGGCTCTGGTTCAAATGACCCAGCATTTTCTCGATCACAGGTGACTATTGCTGTACCCGTTCCTGCGAACTTTACAGGTACTGCAAATTGTTATTTAAGTGTTGGTCAAGGTGGTGGTGTGACAGAGTTGAGTGCACCAAGTAGTAACGATGTATGGACGCCGCTTCTATTTAAAGACGGCGGAGACTTGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7db355f41a8400ebccf98b4a9add052bfef241c8810ad75c18aa6f0efaf2fb87
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6964
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50