Protein

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UniProt accession
E3SF66 [UniProt]
Protein name
Long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MATLKSIQFKRSKTPGAKPTAAQLDEGELAINLRDRTIFTKSDQGQIIDLGFAKGGTIDGDVLQNGTFNLNGNQFVYAGKYIEFLPKTTGNGAWANQHLNKAPIFTDLSSTTSVSEYHPLIKQRYKDGTFSVGTLVSEGSFRVHYIDSTAPDNSKHWVFNRNGNFIVDSGNIEVRTGNISASGNINSANGIVSAPQVITKNIILDSKNFGQYDSQSLVNYVYPGTGETNGVNYLRKVRAKSGGTMWHELCTAQTGQADELSWWTGNTPTSKQYGIRNDGRMAGRNSLALGTFTTDFPSSDYGNFGIMGDKYLVLGDTVTGLKYIKQGVYDLVGGGYSVASITPDSFRSTRKGLFGRSEDQGETWIMPGTNKALLSVQTQADNNAAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQKGMEVNPGILKLVTGSDNLQFYANGTISSIQPIKLDNEIFLTTSNNTAGLKFGAPSGVNETRAIQWNGGTREGQNKNYVIVKAWGNSFNAAGDKSRETVFQVSDGQGYYFYAHRKAPTGDETIGRIEAQFAGALNAKSINAIENFKVNGLSTLVGGVTMSNGLNLTGGANISGPVKIGGVTNALRIWDSRYGAIFRRSETSLHIIPTNENEGENGAISNLRPFSIELGTGTVIMGDKSTGGPLFTVDNVSKFVQTDCRFRVNMDSDGIVVNASSQAASNFIQGRKADVTKWYLGIGDGGNVVRMHNYTYSHGIALNSDTVDITKPLKVGNAQLGTDGNITGGSGNFGNLNTTIENMKADIVTSYPVGAPIPWPSDSVPDGFALMEGQTFDTGAYPKLAIAYPTGTIPDMRGQTIKGTPSGRAVLSAEADGVKSHNHSASASTTALTGTTNGTDLGTKTVSTVDIGRKYTNNAGAHTHTFSGTTSTNGDHNHPASLGNNANVQSGRFAASNSGQSAIAYTNNAGNHSHTFSGTTSAGPEHSHYVDIGSHNHTVAIGSHSHTFSIAAHGHTITVNNTGNTENTVKNIAFNYIVRLA
Physico‐chemical
properties
protein length:1009 AA
molecular weight: 107350,38520 Da
isoelectric point:8,64361
aromaticity:0,08325
hydropathy:-0,41695

Domains

Domains [InterPro]
G3DSA:6.20.80.10
682–739
G3DSA:6.20.80.10 SSF88874
IPR048388
683–756
IPR048388 IPR037053
IPR051934
715–1009
IPR051934
IPR011083
782–829
IPR011083
E3SF66
1 1009
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SP18
[NCBI] 		645664 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sonnei
[NCBI] 		624 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Shigella

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0098024 virus tail, fiber Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
41b008d3e8632e9db9d9609f9a5aa78aa31ed01cb9d232765b683dd6df7cccf5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phenotypic characterization and genomic analysis of the Shigella sonnei bacteriophage SP18. Kim KH, Chang HW, Nam YD, Roh SW, Bae JW 2010-04 20437154 PubMed
Phenotypic characterization and genomic analysis of the Shigella sonnei bacteriophage SP18 Kyoung-Ho Kim, Ho-Won Chang, Young-Do Nam, Seong Woon Roh, Jin-Woo Bae 2010-04 10.1007/s12275-010-0055-4 DOI