Protein

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UniProt accession
A0A4Y1NU56 [UniProt]
Protein name
Tail tubular protein B
RBP type
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MPLVSRTIPNLVQGVSQQPEVLRLNSQAGEQINGFSSVVEGLKKRPPTNYVAKLSNSSFGNAYIHTINRDTTERYIVVITNGVLNVYELDGTAKTVVNQTGSTAYITTANPKQDFVCVTVADYTFILNKTKTTAMKATTSSAKIEQATYSVLQGVNSTEYSLTIDGITYSITSGSTSSKAIRDSLFSAVGSPSGITLTKIGDSSFAIVKSSGTLEVTASDGYGDDASQVVKDKVQNFSDLPVPAIDGQIVEITGEAGNTFDNYFVKFISADNLWEETVAPDTKTTIDELTMPHVLIRTADGNFRFSQVDGSSYTISGTTYNVPSWGKRLVGDINTVLDPSFIGRKLNDVFFHRNRLGFLSDENVIFSRASEFFEFFPETITQVLATDPIDVAGTHTKVAILRHAISFDEELLLFSDQTQFILSGGAVLSSENVRIDVTTEFETDKNVKPIGAGSNVYFAFNKGNYQGLREFFIASDTDTKQADDITANVPKYIPANVFKLASATTENILVALSSDEENSLYIYQYYVSQSRRLQSAWSKWTFGTSATDSILNVDFIENVLYLINERSDGVYLEEIDVSPALTDTGETYLTHLDRKLNNTQITEVYNAGTNQTTITLPYTITNTMRVVGRSGATNKAGQAISTVSQSGTTIVVTGDITAQNYFIGEQYEFSFLFSQQFIQVADSQGSRISVKEGRLQIRNWSVSFNDTGYFTAEVQPVGRSISTTTYTGTITGSGLLGTVNLDDGDFTFAVQSENDKLTVTIKNDSHLPSNFINASWQGYYVTASQRV
Physico‐chemical
properties
protein length:787 AA
molecular weight: 86112,59240 Da
isoelectric point:4,75006
aromaticity:0,10038
hydropathy:-0,17891

Domains

Domains [InterPro]
IPR058003
TTP
1–787
IPR058003
A0A4Y1NU56
1 787
Architecture
TTP
TTP 1-787
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A4Y1NU56
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,9555
Central domain 134 346 214 0,1988
C-terminal 347 787 440 0,2567
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-133
Central
134-346
C-terminal
347-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC025P
[NCBI] 		2259657 Uroviricota > Caudoviricetes > Autographivirales > Thoosavirus > Thoosavirus HTVC025P
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
33e4fa06cceab7ec1a757a1bc9d13eaefd4e040cf3a8e1d5edc32addd5dcae17
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3182
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50