Protein

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UniProt accession
Q775D6 [UniProt]
Protein name
Tail fiber receptor-binding protein
RBP type
TF
Evidence UniProt/Swiss
Probability 1,00
Protein sequence
MSTAVQFRGGTTAQHATFTGAAREITVDTDKNTVVVHDGATAGGFPLARHDLVKTAFIKADKSAVAFTRTGNATASIKAGTIVEVNGKLVQFTADTAITMPALTAGTDYAIYVCDDGTVRADSNFSAPTGYTSTTARKVGGFHYAPGSNAAAQAGGNTTAQINEYSLWDIKFRPAALDPRGMTLVAGAFWADIYLLGVNHLTDGTSKYNVTIADGSASPKKSTKFGGDGSAAYSDGAWYNFAEVMTHHGKRLPNYNEFQALAFGTTEATSSGGTDVPTTGVNGTGATSAWNIFTSKWGVVQASGCLWTWGNEFGGVNGASEYTANTGGRGSVYAQPAAALFGGAWNGTSLSGSRAALWYSGPSFSFAFFGARGVCDHLILE
Physico‐chemical
properties
protein length:381 AA
molecular weight: 39523,19630 Da
isoelectric point:6,44375
aromaticity:0,11286
hydropathy:-0,10184

Domains

Domains [InterPro]
G3DSA:2.10.10.30
1–55
G3DSA:2.10.10.30 G3DSA:2.80.20.10 IPR042095
IPR041352
5–41
IPR041352 IPR054114 IPR016187
SSF141658
6–170
SSF141658
Q775D6
1 381
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BPP-1
[NCBI] 		2885909 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR97674.1 [NCBI]
Genbank nucleotide accession
AY029185 [NCBI]
CDS location
range 3438 -> 4583
strand -
CDS
ATGAGTACCGCAGTCCAGTTCCGCGGCGGCACGACCGCCCAGCACGCCACGTTCACGGGCGCCGCCCGTGAGATTACCGTCGATACCGACAAGAACACGGTCGTTGTGCATGACGGTGCCACCGCTGGCGGCTTCCCCCTGGCGCGGCACGATCTGGTGAAAACGGCTTTCATCAAGGCCGACAAGTCGGCCGTCGCCTTCACGCGCACCGGCAACGCAACGGCCAGCATCAAGGCTGGCACCATCGTGGAGGTCAACGGCAAGCTGGTGCAGTTCACCGCCGACACGGCCATCACCATGCCGGCGCTGACGGCCGGCACCGACTACGCCATCTACGTCTGCGACGATGGCACGGTGCGCGCCGATTCCAACTTTTCGGCGCCCACTGGCTACACCTCGACCACGGCGCGCAAGGTGGGCGGCTTCCACTATGCGCCGGGAAGCAACGCTGCAGCGCAGGCTGGCGGAAACACCACGGCGCAGATCAACGAATACAGCCTGTGGGACATCAAGTTCCGCCCGGCTGCGCTCGACCCGCGCGGCATGACGCTGGTGGCCGGCGCGTTTTGGGCGGACATCTATCTGCTAGGCGTCAACCACCTGACCGATGGCACCAGCAAATACAACGTGACCATCGCGGACGGCAGCGCGTCCCCGAAGAAATCTACCAAGTTCGGCGGCGACGGCAGCGCGGCCTACAGCGACGGCGCCTGGTACAACTTCGCCGAGGTCATGACTCACCACGGCAAGCGCCTGCCCAACTACAACGAATTCCAGGCGCTGGCTTTCGGCACGACCGAGGCTACGTCCAGCGGCGGCACCGACGTGCCCACCACCGGCGTGAACGGCACGGGCGCCACGAGCGCGTGGAACATCTTCACGTCCAAGTGGGGCGTTGTGCAGGCGTCCGGTTGCTTGTGGACGTGGGGTAACGAGTTCGGCGGCGTGAATGGCGCATCCGAATACACGGCCAACACTGGCGGCCGCGGATCGGTGTACGCCCAGCCCGCTGCTGCGCTATTCGGCGGCGCCTGGAACGGCACGTCGCTCTCGGGTTCTCGCGCTGCGCTCTGGTACAGCGGGCCGTCGTTCTCGTTCGCGTTCTTCGGGGCGCGCGGCGTCTGTGACCACCTGATTCTTGAGTAG

Gene Ontology

Description Category Evidence (source)
GO:0098024 virus tail, fiber Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098671 adhesion receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0098678 viral tropism switching Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

1 / 7
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Three-dimensional structure of tropism-switching Bordetella bacteriophage. Dai W, Hodes A, Hui WH, Gingery M, Miller JF, Zhou ZH 2010-03-02 20160083 PubMed
The C-type lectin fold as an evolutionary solution for massive sequence variation. McMahon SA, Miller JL, Lawton JA, Kerkow DE, Hodes A, Marti-Renom MA, Doulatov S, Narayanan E, Sali A, Miller JF, Ghosh P 2005-10 16170324 PubMed
Tropism switching in Bordetella bacteriophage defines a family of diversity-generating retroelements. Doulatov S, Hodes A, Dai L, Mandhana N, Liu M, Deora R, Simons RW, Zimmerly S, Miller JF 2004-09-23 15386016 PubMed
Selective ligand recognition by a diversity-generating retroelement variable protein. Miller JL, Le Coq J, Hodes A, Barbalat R, Miller JF, Ghosh P 2008-06-03 18532877 PubMed
Three-dimensional structure of tropism-switching <i>Bordetella</i> bacteriophage Wei Dai, Asher Hodes, Wong H. Hui, Mari Gingery, Jeff F. Miller, Z. Hong Zhou 2010-02-16 10.1073/pnas.0915008107 DOI
Tropism switching in Bordetella bacteriophage defines a family of diversity-generating retroelements Sergei Doulatov, Asher Hodes, Lixin Dai, Neeraj Mandhana, Minghsun Liu, Rajendar Deora, Robert W. Simons, Steven Zimmerly, Jeff F. Miller 2004-09 10.1038/nature02833 DOI
The C-type lectin fold as an evolutionary solution for massive sequence variation Stephen A McMahon, Jason L Miller, Jeffrey A Lawton, Donald E Kerkow, Asher Hodes, Marc A Marti-Renom, Sergei Doulatov, Eswar Narayanan, Andrej Sali, Jeff F Miller, Partho Ghosh 2005-09-18 10.1038/nsmb992 DOI
Selective Ligand Recognition by a Diversity-Generating Retroelement Variable Protein Jason L Miller, Johanne Le Coq, Asher Hodes, Roman Barbalat, Jeff F Miller, Partho Ghosh 2008-06-03 10.1371/journal.pbio.0060131 DOI