Protein

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Genbank accession
CAB4183253.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MAQIRKGTTYATGDQITATNLNAHVDSAILLPGAVTEQTVGTSINSTDRLLAADSALKTLTVAQVQSGLVRSDGTVAMTGELQLSSSTPSAALKAASKGYVDAAIIAAIAAATSTIVTQAAPTGCIMAWPGSTPPSGWIECNGQASTTPALVALVGANVPDLRGQFIRGWDHGSGLDPSRGLLSYQGAYAGNNTYTFGKDDGDGQTGPRGEVNSVTINSTDITVATDRSGFFTRTIDTNAGDTRPVNKALMFIIKT
Physico‐chemical
properties
protein length:256 AA
molecular weight: 26239,00300 Da
isoelectric point:5,29958
aromaticity:0,05078
hydropathy:-0,03047

Domains

Domains [InterPro]
SSF88874
116–255
SSF88874
IPR037053
120–168
IPR037053
IPR011083
124–167
IPR011083
CAB4183253.1
1 256
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4183253.1 [NCBI]
Genbank nucleotide accession
LR797034 [NCBI]
CDS location
range 34807 -> 35577
strand -
CDS
ATGGCTCAAATACGCAAAGGCACTACATACGCAACTGGCGATCAGATCACAGCAACGAACCTTAACGCGCACGTTGATAGCGCCATTCTTTTGCCCGGAGCAGTTACTGAGCAGACTGTTGGCACTTCAATCAACTCTACTGACAGACTTCTTGCTGCTGACTCTGCTCTTAAGACGCTAACTGTAGCTCAAGTGCAGTCCGGCCTTGTTCGCTCCGATGGCACAGTTGCCATGACAGGTGAATTACAGCTTTCCAGCTCCACGCCATCTGCTGCGCTTAAAGCTGCCTCTAAGGGCTACGTTGATGCTGCTATTATTGCTGCCATTGCCGCAGCAACAAGCACCATTGTGACGCAGGCTGCGCCTACGGGCTGCATCATGGCATGGCCCGGCAGCACGCCTCCGTCTGGCTGGATCGAGTGCAATGGACAGGCATCAACTACACCTGCGCTTGTTGCACTTGTTGGAGCAAATGTTCCCGACCTCCGTGGACAATTTATTCGTGGATGGGATCATGGATCTGGACTTGATCCAAGTCGCGGGCTTTTGTCTTATCAAGGTGCATATGCTGGGAATAACACTTATACTTTTGGAAAAGACGATGGAGATGGGCAAACTGGACCGCGTGGAGAGGTTAATTCTGTTACAATAAATTCAACTGATATAACTGTTGCAACAGACAGAAGTGGATTCTTTACAAGAACAATTGATACAAATGCCGGTGATACTCGCCCAGTAAACAAGGCGTTGATGTTCATAATTAAGACGTAA

Tertiary structure

PDB ID
4f671cfd412c2867de2efc1143213ccc13c22d99892d369f56824b1bfb5e8d9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7324
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50