Protein

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Genbank accession
XWX34839.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MTKSRWVNIYKPSGNMSLTESIKGLNFVEWEIPSVSTVNNDSEIQGRDGVIPGAINFAPFSLVLKFYYSGNDMADLNLFSQTIKSIVHSRELYYVSHSDMPDFKYAVNKAEIEWEVINHGDATFTVTFNCYKGYAESLYSTDDYNLMSNFWQYESGLISDTDIKYVHDKNKFKIYNASSDIINPLLDHNLDIYMTVTAPNGFRMLNKTNKTEFNYLGKQLKKEGTILLNKTYPYIKNKRIGKDTDKGYIILDKGFNDIELSGDGLIVSEIKYDFNFIYR
Physico‐chemical
properties
protein length:279 AA
molecular weight: 32143,91860 Da
isoelectric point:5,59974
aromaticity:0,13978
hydropathy:-0,40968

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
14–135
G3DSA:2.40.30.200 DC_0197
IPR008841
STR
30–130
IPR008841
IPR008841
STR
30–140
IPR008841
XWX34839.1
1 279
Architecture
ATT
STR
ATT 14-135 | STR 136-279
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX34839.1
1 279
Domain Start End Length (AA) Confidence
N-terminal 1 277 277 0,7950
Central domain 278 277 1 0,0286
C-terminal 278 279 1 0,8981
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-277
Central
278-277
C-terminal
278-279

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_68
[NCBI] 		2815634 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX34839.1 [NCBI]
Genbank nucleotide accession
MZ417342 [NCBI]
CDS location
range 11028 -> 11867
strand -
CDS
TTGACTAAGAGTAGATGGGTTAATATATATAAGCCAAGTGGAAACATGTCACTGACTGAAAGTATTAAAGGTCTAAACTTTGTCGAGTGGGAAATTCCATCCGTATCTACAGTGAATAATGATTCAGAAATTCAAGGAAGAGATGGTGTAATACCAGGAGCGATTAATTTCGCTCCTTTTTCTTTGGTTTTAAAATTCTATTATTCAGGCAATGATATGGCTGATTTAAATCTATTCTCACAGACAATTAAAAGTATAGTTCATAGTAGGGAGTTATATTATGTATCTCACTCTGATATGCCTGATTTCAAGTATGCTGTCAATAAAGCAGAAATAGAATGGGAAGTAATAAATCATGGTGATGCAACATTCACTGTAACCTTTAATTGTTATAAAGGATATGCAGAATCATTATACTCTACAGATGATTATAACTTAATGTCTAACTTTTGGCAATATGAAAGTGGTTTAATATCTGATACGGATATTAAATATGTTCATGATAAAAACAAGTTTAAAATTTATAATGCTTCTAGTGATATTATAAATCCTTTACTTGACCACAATTTAGATATTTATATGACAGTAACAGCTCCTAATGGATTTAGAATGTTAAATAAAACTAATAAAACAGAGTTTAACTATTTAGGTAAACAATTAAAAAAAGAAGGAACAATACTTCTTAATAAAACTTATCCCTATATTAAAAATAAAAGGATAGGGAAAGATACAGACAAGGGATATATAATTCTTGACAAAGGATTTAATGATATTGAATTATCAGGAGATGGGTTAATTGTTTCTGAAATAAAATATGATTTTAACTTTATATATAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7de1741cc00d845dbd64c80d82ecbdc56ebe0729aa79bf3313bfe785dc49e03
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8360
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank