Protein

View in Explore
Genbank accession
XAQ48626.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,56
Protein sequence
MADLGAIGASYGLGSLRGPNPSAYSSYARPSARQTAVPSPRPLMGRGFVRYRVPTAVPGTPSWAGGPRPVGAEPAAVYAVGGTVKQRLNGVDSPLANCLVRLYARRTGMPAGAALTGLDGSFRVGNLLPETAGFFAIAFDPDGAPVQNALIFDRLQALPSVPGRIRNSAPSFTVDVAVSLQLTTAYLVGAPAFSVSSGALPDGVALSSSGLLSGTPTTDGEAYSFTITATGSIYGTASVTWSGEVAGGIGYLNTLNGRTGLNNVWSGQVDDSNTVLPALPFQFPLFGLTFQNNIYISSNSHVDFGFGSSAYSGLSPTNPGRALLINAADRSYQNVFAGPVLSGACFLIRYEGSSNTGNSNDNLWEVGLYNDGSITVVTGTVPGSSSPNGAGTSNISDGTAWRSVTPPTFLSNRAYLGQPTGPGGDFVWTEITP
Physico‐chemical
properties
protein length:433 AA
molecular weight: 44470,02040 Da
isoelectric point:5,87314
aromaticity:0,09469
hydropathy:0,02379

Domains

Domains [InterPro]
IPR013783
155–245
IPR013783
IPR015919
171–241
IPR015919
XAQ48626.1
1 433
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XeuM-YB23
[NCBI] 		3144279 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAQ48626.1 [NCBI]
Genbank nucleotide accession
PP756300 [NCBI]
CDS location
range 42367 -> 43668
strand +
CDS
GTGGCCGACCTGGGCGCAATTGGCGCTTCGTACGGGCTGGGGTCGCTCCGCGGGCCCAACCCCTCGGCCTACAGCAGCTACGCCCGACCCTCGGCGCGGCAGACGGCCGTGCCGTCACCTCGGCCCCTCATGGGGCGGGGCTTCGTGCGCTACAGGGTGCCGACGGCCGTGCCGGGCACCCCGTCCTGGGCCGGAGGTCCGAGGCCCGTCGGCGCCGAGCCGGCCGCGGTGTACGCGGTCGGCGGCACGGTGAAGCAGAGGCTAAACGGCGTGGACTCGCCGCTGGCGAACTGCCTGGTGCGCCTGTACGCCAGGCGGACCGGCATGCCCGCCGGCGCGGCCCTGACCGGCCTGGACGGATCCTTCAGGGTCGGCAACCTGCTGCCCGAGACCGCCGGGTTCTTCGCGATCGCCTTCGACCCCGACGGTGCCCCGGTCCAGAACGCCCTGATCTTCGACAGGCTGCAGGCCCTGCCGAGCGTGCCGGGCCGCATCCGCAATTCCGCGCCGAGCTTCACCGTCGACGTGGCGGTGTCCTTGCAGCTCACCACGGCGTACCTGGTCGGCGCCCCGGCGTTCTCGGTCAGCTCCGGGGCCCTGCCCGACGGAGTCGCCCTCAGCTCCTCGGGCCTGCTGTCTGGCACCCCGACGACCGATGGCGAGGCCTACTCGTTCACCATCACCGCCACCGGCTCCATCTACGGCACGGCCTCGGTGACCTGGTCTGGCGAGGTCGCCGGCGGTATCGGCTACCTGAACACGCTCAACGGCCGTACCGGCCTGAACAACGTCTGGTCCGGCCAGGTGGACGACAGCAACACCGTGCTGCCGGCGCTGCCGTTCCAGTTCCCGCTGTTCGGCCTGACGTTCCAGAACAACATCTACATCAGCTCCAACAGCCACGTGGACTTCGGCTTCGGGTCGAGCGCGTACTCTGGGCTGTCGCCCACCAACCCGGGACGGGCGCTGCTCATCAACGCGGCCGACCGGTCCTACCAGAACGTCTTCGCCGGGCCCGTGCTGTCTGGCGCCTGCTTCCTGATCCGATACGAGGGCTCCTCCAACACTGGCAACAGCAACGACAATCTGTGGGAGGTCGGCCTCTACAACGACGGCAGCATCACGGTCGTCACCGGCACGGTGCCAGGCAGCTCGTCGCCGAACGGCGCGGGCACGTCCAACATCTCGGACGGCACCGCCTGGCGCAGCGTCACGCCGCCCACCTTCCTCAGCAACAGGGCCTACCTCGGTCAGCCGACCGGGCCTGGGGGCGACTTCGTATGGACGGAGATTACGCCGTGA

Tertiary structure

PDB ID
c40d7b16b9957d85b263af1d7fa4cde25e7efc0d104484b6039f204ade523735
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7510
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
complete genome sequence of Xanthomonas phage vB_XeuM-YB23 Kim,Y.B., Park,E.J. and Kim,J.H. 2021-01-07 — GenBank