Protein

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Genbank accession
AIX38902.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MSQLKVNSIKGINVPASGPQIDIGNTGDINLNNSNVTGVTTATATTANITTNNVTTENVTTLNVTNTLDLRNADQLIVPSGTNAERPATPNVGTIRYNTETGKPEFWNGSTWKNFTVQRFSEEISSGSSWSVPAGVTSVDVLVVAGGGDGGSGTGGGGGAGGVVYATGFGVTPGGSVPISIGAGAAGGGQGRGRNGSNSTFGTITANGGGGGGSTYPPQRAAGRPGGSGGGGAQHPAGRSGNGSATQPASPSGGGVGYGNAGAPGGEGGGGGAGGRGSGNQGGVGVTITVGETDYAVGGGGRGQSRSPQSGNGAGVPFGGGGTNGTVGRTGIDGTGGGGGAGWGFSGGRRGAGGDGRIYISYLN
Physico‐chemical
properties
protein length:364 AA
molecular weight: 34349,39750 Da
isoelectric point:9,33884
aromaticity:0,04945
hydropathy:-0,36374

Domains

Domains [InterPro]
IPR049304
127–362
IPR049304
AIX38902.1
1 364
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014b
[NCBI] 		1493508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX38902.1 [NCBI]
Genbank nucleotide accession
KJ019132 [NCBI]
CDS location
range 29746 -> 30840
strand +
CDS
ATGTCACAACTTAAAGTTAATTCTATTAAGGGCATCAATGTTCCTGCATCGGGACCGCAAATTGATATTGGTAACACAGGAGATATTAATCTTAATAACTCTAATGTTACTGGTGTTACTACGGCAACCGCAACGACTGCGAACATTACTACCAATAATGTAACTACAGAAAATGTAACAACTTTGAATGTTACTAATACTCTGGACTTGCGTAATGCAGACCAGTTAATTGTTCCTTCAGGAACAAATGCTGAGAGACCTGCAACACCAAATGTTGGTACGATCCGATATAATACTGAAACTGGTAAACCAGAATTCTGGAATGGATCTACATGGAAAAATTTCACTGTTCAAAGATTCAGTGAAGAAATTAGCTCAGGTTCTAGTTGGAGTGTTCCTGCTGGTGTAACTTCTGTCGATGTTTTAGTAGTTGCTGGCGGTGGTGATGGCGGTTCAGGCACTGGCGGCGGTGGTGGTGCTGGTGGAGTTGTTTATGCTACTGGATTTGGTGTAACTCCTGGTGGGAGTGTTCCAATTTCTATTGGTGCAGGTGCTGCTGGTGGTGGTCAAGGTAGAGGTCGTAACGGTTCTAACAGCACCTTTGGCACCATCACTGCTAACGGTGGTGGTGGCGGTGGGTCTACTTACCCTCCTCAGCGTGCTGCTGGTCGCCCTGGCGGTTCAGGCGGTGGCGGTGCTCAACACCCAGCAGGTAGAAGTGGCAACGGTAGCGCAACTCAACCTGCATCTCCATCAGGCGGCGGCGTTGGTTATGGCAATGCAGGTGCTCCAGGTGGCGAAGGCGGCGGTGGTGGCGCTGGTGGTAGAGGTTCAGGCAATCAGGGCGGTGTTGGTGTTACCATCACTGTTGGTGAAACTGACTATGCAGTAGGTGGCGGCGGTAGAGGTCAATCTCGTTCTCCTCAATCTGGAAATGGTGCTGGTGTTCCCTTTGGTGGTGGCGGTACTAACGGCACTGTTGGTCGTACTGGTATCGATGGCACTGGTGGCGGCGGTGGTGCTGGATGGGGGTTCAGTGGTGGACGCCGTGGCGCTGGTGGCGATGGTCGTATTTACATTTCATATCTGAACTGA

Tertiary structure

PDB ID
d730ddd5644fcc55af74a87b05efe7a9865cf0e1e96730d3d415dce277c4efbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7523
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank