Protein

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Genbank accession
AIX23993.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MSELNVGTISVSGQIITSSGLKLTSFINSNRPAADIGTLIYNSEEEVVQLWSGTEWIDVGGSSRLDGSTIQKAAPSATAILQLNPSSSNGYYWIKPLSSSQPKYVYCDMTTDGGGWMLMINARAGNGGQYYNNNAYGLSIINGNNNVVEYNKSTTSMYSRTDITEFFKISGFKYGRITPISGTTINSPYTGLYQRIGTTIDSEWGGTLFDCSNRGSLTSSTYSWCLVQYQNWSEVQSGTNSQTGTYTGGNHYYPTTYANNYQNFWKGSGDGIRISSTFRSNDYSSIGQNTTSGYFWIKTT
Physico‐chemical
properties
protein length:300 AA
molecular weight: 32893,69890 Da
isoelectric point:5,85512
aromaticity:0,13000
hydropathy:-0,45733

Domains

Domains [InterPro]
DC_0326
STR
1–299
DC_0326
IPR014716
Unmapped
62–163
IPR014716
NF040941
Unmapped
76–119
NF040941
IPR036056
STR
76–127
IPR036056
IPR002181
Unmapped
87–133
IPR002181
AIX23993.1
1 300
Architecture
STR
STR 1-299 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX23993.1
1 300
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,2153
Central domain 137 289 154 0,1596
C-terminal 290 300 10 0,9851
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-289
C-terminal
290-300

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX23993.1 [NCBI]
Genbank nucleotide accession
KJ019069.1 [NCBI]
CDS location
range 104125 -> 105027
strand +
CDS
ATGTCGGAATTAAACGTAGGTACAATAAGTGTATCCGGACAAATTATAACTTCATCTGGTTTAAAATTAACCTCGTTTATTAACTCAAATAGACCAGCGGCAGATATAGGTACTCTAATTTACAATAGTGAAGAGGAAGTAGTTCAATTGTGGAGTGGTACTGAATGGATTGATGTAGGAGGATCCTCTAGATTAGATGGATCTACTATTCAAAAAGCTGCTCCATCAGCAACCGCCATTTTACAATTAAATCCATCTTCTTCAAATGGATACTATTGGATAAAACCACTATCTTCTTCCCAACCAAAATATGTTTATTGTGATATGACAACAGATGGTGGTGGATGGATGTTAATGATCAATGCTAGAGCAGGTAATGGTGGACAATATTATAATAATAATGCATATGGGTTAAGCATTATTAATGGAAATAATAATGTTGTTGAGTATAATAAATCCACTACTTCAATGTATTCGCGGACTGATATAACTGAATTTTTTAAAATTTCTGGATTTAAATATGGTAGAATAACACCAATTAGTGGCACAACCATTAATTCTCCATACACTGGTTTGTATCAAAGAATAGGCACTACTATAGATTCTGAGTGGGGAGGAACTTTATTTGATTGTTCAAACAGAGGATCTTTAACAAGTTCTACGTATAGTTGGTGCTTAGTTCAATATCAAAATTGGTCTGAAGTACAGTCAGGAACAAATTCACAAACAGGAACATATACTGGTGGTAATCACTATTATCCAACAACATATGCTAATAACTACCAAAATTTTTGGAAAGGAAGTGGAGATGGTATTAGAATCAGTAGCACTTTTAGATCTAATGATTATAGCAGTATTGGACAAAACACTACGTCTGGATATTTCTGGATAAAAACAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
716ded3e2236e662122cae820d8ee7bded56180271b45ed9ad1f86e4ed513f6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5342
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank