Protein

View in Explore
Genbank accession
AIX23993.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence Phold
Probability 1,00
Protein sequence
MSELNVGTISVSGQIITSSGLKLTSFINSNRPAADIGTLIYNSEEEVVQLWSGTEWIDVGGSSRLDGSTIQKAAPSATAILQLNPSSSNGYYWIKPLSSSQPKYVYCDMTTDGGGWMLMINARAGNGGQYYNNNAYGLSIINGNNNVVEYNKSTTSMYSRTDITEFFKISGFKYGRITPISGTTINSPYTGLYQRIGTTIDSEWGGTLFDCSNRGSLTSSTYSWCLVQYQNWSEVQSGTNSQTGTYTGGNHYYPTTYANNYQNFWKGSGDGIRISSTFRSNDYSSIGQNTTSGYFWIKTT
Physico‐chemical
properties
protein length:300 AA
molecular weight: 32893,69890 Da
isoelectric point:5,85512
aromaticity:0,13000
hydropathy:-0,45733

Domains

Domains [InterPro]
IPR014716
62–163
IPR014716
NF040941
76–119
NF040941
IPR036056
76–127
IPR036056
IPR002181
87–133
IPR002181
AIX23993.1
1 300
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX23993.1 [NCBI]
Genbank nucleotide accession
KJ019069 [NCBI]
CDS location
range 104125 -> 105027
strand +
CDS
ATGTCGGAATTAAACGTAGGTACAATAAGTGTATCCGGACAAATTATAACTTCATCTGGTTTAAAATTAACCTCGTTTATTAACTCAAATAGACCAGCGGCAGATATAGGTACTCTAATTTACAATAGTGAAGAGGAAGTAGTTCAATTGTGGAGTGGTACTGAATGGATTGATGTAGGAGGATCCTCTAGATTAGATGGATCTACTATTCAAAAAGCTGCTCCATCAGCAACCGCCATTTTACAATTAAATCCATCTTCTTCAAATGGATACTATTGGATAAAACCACTATCTTCTTCCCAACCAAAATATGTTTATTGTGATATGACAACAGATGGTGGTGGATGGATGTTAATGATCAATGCTAGAGCAGGTAATGGTGGACAATATTATAATAATAATGCATATGGGTTAAGCATTATTAATGGAAATAATAATGTTGTTGAGTATAATAAATCCACTACTTCAATGTATTCGCGGACTGATATAACTGAATTTTTTAAAATTTCTGGATTTAAATATGGTAGAATAACACCAATTAGTGGCACAACCATTAATTCTCCATACACTGGTTTGTATCAAAGAATAGGCACTACTATAGATTCTGAGTGGGGAGGAACTTTATTTGATTGTTCAAACAGAGGATCTTTAACAAGTTCTACGTATAGTTGGTGCTTAGTTCAATATCAAAATTGGTCTGAAGTACAGTCAGGAACAAATTCACAAACAGGAACATATACTGGTGGTAATCACTATTATCCAACAACATATGCTAATAACTACCAAAATTTTTGGAAAGGAAGTGGAGATGGTATTAGAATCAGTAGCACTTTTAGATCTAATGATTATAGCAGTATTGGACAAAACACTACGTCTGGATATTTCTGGATAAAAACAACATAA

Tertiary structure

PDB ID
716ded3e2236e662122cae820d8ee7bded56180271b45ed9ad1f86e4ed513f6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5342
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank