Protein

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Genbank accession
WWO60420.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MANHFRLYGRPLMADEVADGLSVTGVLEGYTAGEAYESRLSINNPVGRCTVEVIESTLPPGAAVRVDNITKEVVVKWAAFTEVVDEETLVPNGDFEAGDDGTWVPGGGSNGEGWSIGTGPDYDTDSGVYSARFADIKTGGSDLLNPLIPAKVNDYIRCTAEVQQGASSKGKAGARVSLIYRKEDGTELQRNWGNLVKSGSNGAWHQSVAEGAAPKDTKYVQVVLSAFRSKQNKPLWVDTVKWNHKYVLGQEDDSDYSLYIKVTDGANRVAYWRGGIGIDATYVIGQLYPVSVYDDASAHMPTAQLNLGAGANLLDYAAAGMPGVVSLSSRSAVLRVAVLEDTVSLASMPYIAGMSSQSVVNRRVLPKEDYTKTNMPTIIGGTSAKVVVRTSGYVDSTKTGMPTIIGMTKT
Physico‐chemical
properties
protein length:410 AA
molecular weight: 43754,59890 Da
isoelectric point:5,20846
aromaticity:0,07805
hydropathy:-0,20293

Domains

Domains [InterPro]
DC_0281
ATT
1–87
DC_0281 G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
87–240
G3DSA:2.60.120.260 DC_1417
WWO60420.1
1 410
Architecture
ATT
STR
RBD
ATT 1-87 | STR 88-246 | RBD 247-409 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SB5
[NCBI] 		3117469 No lineage information
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60420.1 [NCBI]
Genbank nucleotide accession
PP079417.1 [NCBI]
CDS location
range 36299 -> 37531
strand +
CDS
ATGGCTAATCACTTCAGGCTGTACGGCCGACCGCTGATGGCGGACGAGGTTGCAGATGGCCTGTCGGTGACGGGCGTGCTGGAAGGGTACACGGCGGGCGAGGCTTACGAGTCTCGCCTGTCCATCAACAACCCAGTCGGCCGCTGCACCGTGGAGGTCATCGAATCGACGCTCCCTCCGGGCGCTGCGGTGCGAGTGGACAACATCACCAAGGAAGTAGTCGTCAAGTGGGCGGCTTTCACTGAAGTCGTGGACGAGGAAACCCTCGTGCCAAACGGCGACTTCGAGGCAGGCGACGATGGCACGTGGGTGCCGGGCGGTGGGTCGAACGGCGAAGGCTGGTCGATTGGAACCGGCCCGGACTACGATACCGACAGCGGCGTATACAGCGCGCGCTTCGCCGACATCAAGACGGGTGGCAGCGACCTGCTGAACCCGCTGATTCCTGCCAAGGTCAACGACTATATCCGATGCACCGCCGAGGTCCAGCAGGGCGCAAGCTCCAAGGGCAAGGCCGGTGCGCGCGTGTCGCTCATCTACCGCAAGGAGGATGGGACCGAGCTGCAACGAAACTGGGGCAACCTCGTTAAGTCTGGCAGCAACGGTGCGTGGCACCAATCCGTCGCCGAGGGCGCTGCGCCCAAAGACACGAAGTACGTGCAGGTGGTCCTGTCCGCATTCCGCAGCAAGCAGAACAAGCCTCTGTGGGTGGACACCGTTAAGTGGAACCACAAGTACGTGCTGGGGCAAGAGGACGACAGCGACTACTCCCTCTACATCAAGGTGACAGACGGTGCAAACCGCGTCGCTTACTGGCGAGGCGGCATTGGAATTGACGCCACGTATGTCATTGGGCAGCTGTATCCAGTGTCCGTCTATGACGACGCATCCGCACATATGCCGACTGCACAACTCAACCTCGGTGCCGGTGCCAATCTGCTAGACTACGCAGCAGCAGGCATGCCGGGCGTTGTGTCTCTGTCTAGCCGATCCGCCGTTCTTCGTGTAGCTGTGTTGGAAGACACTGTGTCCCTCGCAAGCATGCCGTACATTGCCGGTATGTCTTCGCAGTCCGTGGTAAACCGCCGCGTTCTGCCGAAGGAAGACTACACCAAGACCAACATGCCGACCATCATCGGAGGTACCAGCGCTAAGGTCGTTGTCCGAACGTCGGGCTACGTCGATAGCACCAAGACTGGTATGCCGACCATCATAGGGATGACCAAAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
59a2aa3062eba5777b61ed7eb09f62a23d4fe344fc9548a3477a0ed9c9ab2e8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6595
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank