Protein

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Genbank accession
AXQ70378.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MATTPTSLPIPSEDPRDLKFNAGKFDEVMTSDAHYYVDRFGVKRWTIAGFQYTAEEAIRAYGYITMDSFEDGATLTLPNQVLRYEATGEYYRWDGAFPKAVAAGSTPASTGGVGLGAWISVGDAAFRQEANKKFKYSVKLSDYSTLQDAVTDAVDGLLIDINYNFTDGESVDFGGKILTINCKAKFIGDGALIFNNMGPGSVINQPFMESKTTPWVIFPWDADGKWITDAALVAATLKQSKIEGYQPGVNDWVKFPGLEALLPQNVKDQHIAATLDIRSASRVEIRNAGGLMAAYLFRSCHHCKVIDSDSIVGGKDGIITFENLSGDWGLGNYVIGGRVHYGSGSGVQFLRNNGGESHNGGVIGVTSWRAGESGFKTYQGSVGGGTARNYNLQFRDSVALSPVWDGFDLGSDSGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGMLAHTYNRVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIRAAGIKPQPSNGLVISAPNSTISGLVGNVPADKILVGNLLDPVLGQSRVIGFNSDTAELALRINKLSATLDSGALRSHLNGYAGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVAVTVLPDNAVRDNGAISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:675 AA
molecular weight: 72054,07630 Da
isoelectric point:5,04647
aromaticity:0,09037
hydropathy:-0,08711

Domains

Domains [InterPro]
G3DSA:2.10.10.80
63–119
G3DSA:2.10.10.80 IPR012332
IPR040775
64–123
IPR040775 IPR011050
IPR015331
129–675
IPR015331
AXQ70378.1
1 675
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella virus VSt472
[NCBI] 		2301723 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXQ70378.1 [NCBI]
Genbank nucleotide accession
MH424446.1 [NCBI]
CDS location
range 32464 -> 34491
strand +
CDS
ATGGCTACCACACCGACTAGCTTACCAATCCCGTCAGAAGACCCGCGCGACCTGAAGTTTAACGCTGGTAAATTTGATGAAGTCATGACATCTGATGCACATTACTATGTGGACAGATTTGGCGTAAAACGCTGGACTATTGCTGGATTCCAGTACACTGCGGAAGAGGCCATTCGTGCTTATGGATATATCACAATGGATAGCTTTGAAGATGGCGCGACGTTGACGCTACCAAATCAGGTGCTACGTTACGAGGCAACCGGAGAATATTACCGATGGGATGGTGCATTTCCTAAGGCTGTAGCTGCTGGTTCAACTCCTGCATCAACTGGTGGCGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGACGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAATTATCAGATTATTCTACATTACAGGATGCAGTTACTGATGCCGTTGATGGATTGCTTATTGATATCAATTACAACTTCACAGATGGTGAGTCTGTAGATTTTGGTGGTAAGATTTTAACCATTAACTGTAAGGCTAAGTTTATTGGAGATGGGGCTTTAATCTTTAATAATATGGGGCCAGGCTCGGTAATTAATCAACCATTCATGGAGAGCAAGACTACTCCATGGGTCATTTTCCCGTGGGATGCTGATGGTAAATGGATTACAGATGCTGCCCTTGTTGCTGCAACGCTGAAGCAATCAAAGATTGAAGGCTATCAACCTGGGGTAAATGACTGGGTTAAATTCCCTGGATTAGAAGCATTACTCCCACAGAACGTTAAAGACCAACATATTGCAGCCACTCTAGATATTCGCAGTGCCAGCCGAGTAGAAATAAGAAATGCTGGTGGTCTTATGGCTGCTTACCTTTTCCGTAGTTGTCATCACTGCAAGGTAATTGATTCAGATAGCATCGTTGGTGGTAAAGATGGAATCATTACCTTTGAGAACCTTAGTGGTGATTGGGGATTAGGTAATTATGTTATTGGTGGACGTGTTCATTATGGTTCTGGTAGTGGTGTTCAGTTCCTGAGAAATAATGGTGGTGAATCCCACAATGGTGGAGTTATTGGTGTTACATCATGGCGAGCGGGTGAGTCTGGTTTCAAGACTTATCAGGGTTCCGTTGGTGGTGGTACTGCACGTAACTATAATCTACAGTTCAGGGATTCTGTTGCATTGTCTCCTGTTTGGGATGGTTTTGACTTGGGTTCTGACTCAGGTATGGCACCAGAACCGGATAGACCTGGGGATTTACCTGTATCTGAATACCCATTCCACCAACTGCCTAATAACCATTTGGTTGATAATATTCTTGTTATGAACTCACTTGGTGTTGGTTTAGGTATGGATGGTCGTGGTGGGTATGTTTCTAACGTTACCGTACAGGATTGTGCTGGTGCAGGTATGCTTGCACATACTTACAACCGTGTATTTTCTAACATTACAGTTATTGATTGTAACTACCTTAATTTTGATTCTGACCAAATTATCATTATAGGTGATTGTATTGTTAATGGGATTAGGGCTGCTGGGATTAAACCACAACCATCAAATGGTCTGGTTATCAGTGCACCAAACTCCACAATAAGTGGGTTGGTCGGTAATGTTCCTGCAGATAAAATTCTTGTTGGTAACTTACTTGACCCAGTATTAGGTCAGTCTAGAGTCATCGGGTTCAATAGTGATACTGCTGAGTTGGCTCTACGTATTAACAAGCTGTCAGCTACTCTGGATAGTGGTGCTTTACGTTCCCATCTGAACGGTTATGCTGGTTCTGGTTCAGCATGGACAGAAATTACCGCTATTGCGGGGTCCTTGCCTGATGCAGTGTCATTAAAAATAAACAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGGTGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGGCTATATCACTGTATCTGGAAGGCGATAGCCTTAAGGCGTTAGTTAAGCGGGCCGATGGAAGCTATACAAGATTAACTTTGGCATAA

Tertiary structure

PDB ID
9ff04fb146b0d6966f65048294681b588fb4f440fee8de52cb52042469c015c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6875
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella Typhimurium bacteriophage VSt472 Volozhantsev,N., Denisenko,E., Verevkin,V., Myakinina,V., Kislichkina,A. and Krasilnikova,V. 2017-09-14 — GenBank