Protein

View in Explore
Genbank accession
AXF53184.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,86
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNNTINHIKDDAQYVKFDPTGNWPSNIKNVQAALAAIQGFAIAGLPTATEETAGIAEIATQKEVDDGLDGTKIVTPKTLAVKLSRPDATKFVKGITRYANNDEAMGDTPNIAIGPDTLTHVFEKKKATETVQGTIKICSMDAAKIGSDDTMAVTPKKMHAAIAQIVPGLIPEQNTATESREGLVRLATSQQTLAGTIREGFAVSPYAFSNARANENQAGTVKIASSQQMIDGNDNTVVVSAQKFANTKATTGQFGVVKLTDNPGSGEANAALSANARVLPLSGGVVTGDVYRHSGGDGNQFTTKNEMDAWCMPIGAIILTAFNSNDHGAFKICNGQWLNKHQYPTLFARIGFTYGGDGGDHFAVPDMRGLVARGCDWGRGLDPGRGFGTYQDDTMQHMTGNFPVANRYRGWTGGAFTITGGQWSTNYKNGGGDDWGSIVNFDSARQVRTSGETRVKSLALNYVIRVQ
Physico‐chemical
properties
protein length:467 AA
molecular weight: 49766,09440 Da
isoelectric point:6,71788
aromaticity:0,07495
hydropathy:-0,35182

Domains

Domains [InterPro]
SSF69349
246–290
SSF69349 IPR037053
SSF88874
311–466
SSF88874
IPR011083
315–371
IPR011083
AXF53184.1
1 467
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia virus KFS-EC
[NCBI] 		2250214 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF53184.1 [NCBI]
Genbank nucleotide accession
MH560358.1 [NCBI]
CDS location
range 23159 -> 24562
strand +
CDS
ATGAATAACACTATTAATCACATAAAAGACGATGCACAGTATGTTAAGTTTGACCCTACCGGAAATTGGCCTAGCAATATAAAAAACGTACAAGCGGCATTAGCCGCTATTCAGGGGTTTGCTATTGCAGGTCTTCCAACGGCAACCGAAGAAACAGCGGGTATTGCTGAAATTGCTACTCAAAAAGAAGTAGATGATGGGTTGGATGGAACTAAAATTGTTACCCCAAAAACATTGGCTGTTAAGCTGTCAAGACCGGACGCAACAAAATTTGTTAAAGGGATCACTCGCTATGCTAATAACGACGAAGCTATGGGCGATACTCCAAATATTGCAATTGGTCCTGATACATTAACCCATGTATTCGAGAAGAAGAAAGCAACGGAAACCGTACAGGGTACAATTAAAATTTGTTCTATGGATGCGGCAAAAATCGGTAGCGATGACACTATGGCAGTTACGCCTAAAAAGATGCACGCTGCTATTGCTCAGATTGTTCCTGGGTTGATTCCAGAACAAAACACGGCGACCGAGTCCCGTGAGGGTTTAGTTAGACTGGCGACAAGCCAACAAACGCTTGCTGGTACTATCAGAGAAGGATTTGCCGTTAGTCCATATGCATTTTCCAACGCAAGAGCAAATGAAAATCAGGCGGGTACGGTTAAAATTGCCTCATCCCAACAAATGATTGACGGTAATGACAACACAGTAGTAGTATCAGCACAAAAATTTGCGAACACTAAAGCAACCACTGGACAATTCGGTGTTGTTAAGCTAACAGATAATCCCGGTTCCGGTGAAGCAAATGCTGCGTTATCTGCAAATGCTCGTGTATTGCCTCTAAGCGGTGGTGTCGTTACCGGTGATGTGTATCGTCATAGCGGAGGCGACGGAAACCAGTTTACCACTAAAAACGAAATGGATGCATGGTGTATGCCAATTGGTGCAATTATTCTAACTGCATTCAATAGCAATGATCATGGCGCATTTAAAATTTGTAACGGGCAATGGTTGAATAAACACCAATATCCTACGCTATTTGCTCGCATCGGATTTACATATGGTGGTGACGGTGGAGACCATTTTGCTGTTCCAGATATGCGCGGTCTTGTTGCTCGTGGGTGCGATTGGGGAAGAGGTTTAGACCCAGGTCGTGGATTTGGTACTTATCAAGACGACACCATGCAACATATGACAGGTAACTTCCCTGTAGCTAACCGCTATCGCGGTTGGACTGGTGGTGCATTTACCATCACAGGTGGTCAATGGAGCACGAACTATAAAAACGGTGGCGGCGATGATTGGGGTAGTATTGTTAACTTTGACAGCGCAAGACAGGTTAGAACGTCTGGCGAAACTCGCGTTAAAAGCCTTGCATTAAACTACGTTATAAGGGTACAATAA

Tertiary structure

PDB ID
8da8542072cb96529f5f274946cee63046952f8895fde94b80b4e08e9a21e7c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7597
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Novel Bacteriophage Infecting Escherichia coli O157:H7 for a Biocontrol Agent Lee,C., Choi,I.Y., Park,D.H. and Park,M.-K. 2016-12-30 — GenBank