Protein

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Genbank accession
ATI18252.1 [GenBank]
Protein name
fibritin neck whiskers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEIIKPVLDDLKYTSDMPVAGSGQKQVEWIKNGEQPQGADPYIVGDKGGVLNRPSTQISANVETLDKNQETILSKMSEVIDKVNIHDDIINAGDGRDLYQRVGDLETEMDVHSGILEEIKETDVILDAKIQSISDNIGVGDPSLRFRTLRADDLHIKKMLGNYKDFDIDGVPSPGSLSSGVKGQIERNYNTGVNLDVRVTSLEKWWEDSTPASLREEVNQIRTELGQDPDPTRNIYSRIGDLEMADETNSPLVQELVEHTGYGEFPLQYLDVQTDSYQTVXNLYDYSLHVKKDVDYISGIAKQTEGLSDDLARSLGSASDSTLDTTAWGRINDLRVRMENNEGILGSSPLDGLQGKVKEVDQREKEHFEDLDGRVSSISTTVNVEYRTSIEDLQNTVGNPNTGLVIKVEGTKNVADDDYRRIGSYQASKDMYEQMYRDYKNGAGYIPNPTETRLGAVWSREYDGANWVWRDLFTTNFVVGDNNKITAIDGTTLVSYSTGSDGKYIPTFGHNGTTKLRIVGDIIGNISLDTTSDIRKYGKTILGSTDQTIKVGQSDKNIVMVGKDIDSFKYNTPTGEFDVLHIGNYKKYITDVNPENGFTLNQNAVIGYAGADVIKLDNTTINIGSANTNLAFKGNVSELIMDQDKAFKMNVGMGKHLNVVNNFGGILTYGDIETTNVFATDLYIQGTGVDRFKVWHQGMDAPADGSFYARKNNQWMVVEQGGSGTGIIGDAPQSGLAYARVNDDGVGFWQAVGERNITLAENVSIMAKTNSGTITAFTVDSATVTTRIGGTTGKINLRGTVSDFKLESKISTSYGSLLESTQTKIVIGDTTTPVNVYSTGNLFVGVGSDAKKVWTDAHDAPNNANFYARKGGQWTLIHDGIDPTKDVSVGETSDFIIGGYNVAKVDTVGVDKLMVIGDSRTFMKFDGKVTNLKLAEVGANNSFGITTQVNNVDKNIISISQPSTEKFIAIGDTDLPVRITASEVTINDDKVLTKDSFEAPADGNKYVRQDGQWTRAYYYGDFATDAPTSPKEGDVFFEFIN
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 113966,10050 Da
isoelectric point:4,68304
aromaticity:0,07981
hydropathy:-0,45144

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
6–104
G3DSA:1.20.5.320 DC_0379 G3DSA:6.20.230.10 DC_0730
SSF58046
ATT
10–108
SSF58046 G3DSA:1.20.5.320
ATI18252.1
1 1041
Architecture
ATT
STR
ATT
STR
ATT 6-108 | STR 109-698 | ATT 699-719 | STR 720-1019 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATI18252.1
1 1041
Domain Start End Length (AA) Confidence
N-terminal 1 458 458 0,9506
Central domain 459 747 290 0,6556
C-terminal 748 1041 293 0,4132
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-458
Central
459-747
C-terminal
748-1041

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS-sw
[NCBI] 		2026113 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ceceduovirus
Host Aeromonas salmonicida subsp. salmonicida
[NCBI] 		29491 Bacteria > Proteobacteria > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATI18252.1 [NCBI]
Genbank nucleotide accession
MF498775 [NCBI]
CDS location
range 99573 -> 102698
strand +
CDS
ATGGAAATTATTAAACCTGTATTGGATGACCTGAAATATACTTCTGATATGCCTGTTGCTGGTTCTGGTCAAAAACAGGTTGAATGGATTAAAAATGGTGAGCAACCACAAGGTGCAGATCCTTATATTGTTGGTGATAAAGGGGGCGTTTTAAACCGCCCCTCTACTCAAATTTCTGCTAACGTAGAGACATTGGATAAAAACCAAGAAACAATCCTTTCTAAGATGTCGGAAGTTATCGACAAGGTGAATATTCATGATGATATAATTAATGCTGGTGATGGGCGAGATTTATATCAACGAGTTGGTGATTTGGAAACCGAAATGGATGTCCATAGCGGAATCCTTGAAGAAATAAAAGAAACCGATGTAATCCTCGACGCAAAAATCCAGTCAATTTCAGATAATATCGGAGTTGGGGATCCATCTCTTAGATTCCGAACTCTCCGAGCAGATGACCTTCATATCAAAAAAATGTTGGGTAATTATAAAGATTTTGATATTGATGGTGTTCCATCACCCGGCTCACTTTCTTCGGGGGTGAAAGGTCAGATCGAACGTAACTATAACACTGGTGTCAACCTTGATGTTCGTGTTACTTCTCTTGAAAAATGGTGGGAAGACTCAACTCCTGCATCTTTGAGGGAAGAAGTTAACCAGATTAGAACCGAACTTGGACAAGACCCTGATCCAACAAGGAACATTTATTCTCGTATCGGCGATTTAGAAATGGCCGACGAAACAAATTCACCTTTGGTTCAAGARCTTGTAGAACACACTGGATAYGGTGAATTYCCTCTYCARTAYCTTGATGTACAAACMGATTCTTATCAAACMGTAGRTAATCTATACGATTAYTCTYTACATGTCAAGAAAGACGTRGATTATATTAGTGGTATCGCCAAACAAACCGAGGGTCTGTCTGATGACTTGGCTCGTTCTCTTGGTTCGGCTAGTGATTCCACACTGGATACCACCGCTTGGGGTAGAATTAATGATCTACGTGTCCGTATGGAGAATAACGAAGGTATTCTAGGATCTAGTCCTCTAGATGGATTGCAGGGAAAAGTTAAAGAAGTAGACCAGAGAGAGAAAGAACATTTCGAAGATCTTGATGGTCGTGTTTCGAGTATATCAACTACTGTTAACGTCGAATATAGAACTTCTATTGAGGATCTACAAAATACCGTAGGTAATCCAAACACAGGTTTGGTTATCAAGGTAGAAGGGACAAAAAACGTCGCTGACGACGATTACCGTAGAATTGGTTCATATCAAGCATCGAAAGATATGTATGAACAGATGTACCGTGATTATAAGAATGGTGCTGGATATATCCCTAACCCAACAGAAACTCGGCTTGGTGCTGTATGGTCGCGAGAATATGATGGTGCTAACTGGGTATGGCGAGATTTGTTTACCACTAACTTTGTGGTTGGTGATAACAATAAGATTACCGCCATCGACGGAACCACACTTGTTTCTTATTCTACTGGTTCTGATGGGAAATATATCCCGACCTTTGGTCATAACGGAACAACCAAACTCCGTATAGTCGGCGACATTATCGGAAATATTTCTCTTGATACAACCTCTGATATCAGAAAATATGGGAAAACTATTCTTGGCTCTACCGATCAAACTATAAAAGTTGGTCAGAGTGATAAGAATATAGTTATGGTTGGTAAGGATATCGATTCTTTCAAGTATAACACACCAACCGGTGAATTTGATGTTCTGCATATTGGGAACTACAAAAAATATATCACCGACGTTAACCCAGAGAATGGATTTACCCTAAACCAGAATGCGGTAATTGGTTATGCAGGCGCAGATGTTATTAAATTAGATAACACTACAATAAATATTGGTTCTGCTAATACAAACCTCGCATTTAAGGGAAATGTCAGCGAATTGATTATGGACCAAGACAAAGCGTTTAAGATGAATGTTGGTATGGGTAAACATCTAAACGTGGTCAATAACTTTGGTGGAATATTGACATACGGTGATATTGAAACTACTAACGTATTTGCAACGGACCTTTATATTCAAGGTACTGGGGTTGATCGGTTTAAGGTTTGGCACCAAGGTATGGATGCACCCGCAGATGGTAGTTTTTACGCTCGTAAGAACAACCAATGGATGGTCGTTGAACAGGGTGGTTCTGGTACTGGTATTATTGGTGATGCACCACAGTCCGGATTGGCATACGCTCGGGTAAATGACGATGGTGTTGGTTTCTGGCAAGCCGTAGGCGAAAGAAATATAACCCTAGCAGAAAACGTATCTATAATGGCAAAAACCAATAGTGGTACGATTACTGCATTTACCGTTGATTCTGCAACCGTAACAACTCGAATTGGTGGAACTACAGGGAAAATAAACCTTCGTGGTACTGTATCCGATTTCAAATTAGAAAGTAAAATTTCTACATCTTATGGTTCTCTTTTAGAAAGTACCCAAACCAAAATAGTGATCGGCGACACAACCACACCAGTGAATGTATATTCTACTGGGAATCTGTTTGTTGGTGTTGGTTCTGATGCTAAGAAAGTTTGGACCGACGCACATGACGCACCAAACAACGCGAATTTCTACGCTCGTAAGGGTGGGCAATGGACTCTAATCCATGACGGTATAGACCCAACCAAGGATGTTTCTGTTGGTGAAACCAGCGATTTCATCATTGGTGGATATAACGTAGCCAAGGTGGATACAGTTGGTGTCGATAAGCTAATGGTTATTGGTGATAGTAGAACGTTCATGAAGTTTGACGGTAAGGTAACTAACCTCAAGCTTGCAGAAGTAGGTGCCAATAATAGTTTCGGTATTACCACACAGGTAAATAATGTCGATAAGAACATAATTAGTATATCGCAACCTTCTACAGAAAAGTTTATCGCAATTGGTGACACCGATCTACCGGTTCGTATTACCGCATCTGAGGTAACAATCAATGACGATAAAGTCCTCACAAAGGATAGTTTCGAAGCACCAGCAGACGGAAACAAGTACGTAAGACAAGATGGTCAGTGGACAAGAGCGTATTACTACGGTGATTTTGCTACAGACGCACCGACCAGTCCTAAAGAAGGTGATGTGTTCTTCGAATTCATCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
510a940c3f78c6bf52db7fe2e1dcf0e28b8f0752a5fffe848fcad37e1be6db92
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5523
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro design and evaluation of phage cocktails against multidrug-resistant Aeromonas salmonicida Chen,L., Yuan,S. and Ma,Y. 2018-07-06 — GenBank