Protein

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Genbank accession
XHH73752.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MRVLKWLENSSDGLQTKMREYESYFTDFNTSMRSNEQEVTAILNANTENIKSEIKKLENQLIETASRLLTSYQIFLNQARDNANNQITENKTQSLEAINQAKTNANNEISENKTQALTNINEAKESARRK
Physico‐chemical
properties
protein length:130 AA
molecular weight: 14978,38080 Da
isoelectric point:5,61844
aromaticity:0,05385
hydropathy:-0,99462

Domains

Domains [InterPro]
Coil
40–67
Coil Coil
XHH73752.1
1 130
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11468_1
[NCBI] 		3331676 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73752.1 [NCBI]
Genbank nucleotide accession
PQ159901.1 [NCBI]
CDS location
range 23547 -> 23939
strand -
CDS
TTGAGGGTCCTTAAATGGTTAGAAAATTCAAGCGATGGACTGCAAACTAAAATGCGAGAATATGAAAGCTATTTTACTGATTTCAATACAAGCATGCGAAGTAACGAGCAAGAAGTAACCGCTATACTAAACGCTAACACCGAGAACATCAAAAGCGAAATCAAAAAGCTAGAAAATCAATTGATAGAAACCGCTAGCAGGCTTTTAACGAGCTATCAAATCTTTTTAAACCAAGCCAGAGATAACGCTAATAACCAAATCACCGAAAACAAAACCCAAAGCCTTGAAGCGATTAACCAAGCTAAAACGAACGCTAACAACGAAATAAGCGAGAATAAAACGCAAGCGCTAACTAACATTAACGAAGCTAAAGAAAGCGCCAGGCGCAAATAA

Tertiary structure

PDB ID
d905d3324997d915c955929047176da32a610768f71bb03910f22b80bd15f5a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9286
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank