Protein

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Genbank accession
ABY52816.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MARELMPKSGIMMPHVVVTRDAAVVGVSTVDGQAGAIDLTGKYLQKTDAAATYQTKTEGASKDFVLDSIQPIMSGALFREDPWVVNDTPFRSTGANGVESVDMMKVTPDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIEDLPFAAIGSYVKDSKGRTIGVNRTGINSDIKQLTQKVTFTQPVTVPDAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVVSDGQLLNRADYPDLWAYAQLLSPIEDSEWVSNVYQRGKYSKGNGTTTFRVPDRNGVQSGSIQGLFGRGDAGSSGSNGVVSDSGAPNITYSSPHTMVTLASASGQVATNGAIQSITSTDDVAPVGTGGKYISTNFDASRSSAVYGRSLSEVVPRNFIGVWTIRAHGGFTAANTSWSVINSDASEQPTGTPITGGLVSSKYVVGGVDKYRSSIQLLGSNEVDLSTRITTINDRYAIGAATWDFKLDGKLLFNKSLTPKGTGESPGNTYLTLANTWMSAAYSGYIGFVGGGVGVSNGGWRNFISLGSLIFPDSSHPTAVISQVYDYDLSTGSQPNGDIVRNTYFSAESYDITFGNNSGTTNYIFSKSPVSDERLKHSIKEEGTATALSNLNKMEYKTFIYNYDEKATVRRGFIAQQLEAIDPQYVRKYKTFKGTDTLALDENVLLLDAIAAIQELTKKVEVLEAKLAEK
Physico‐chemical
properties
protein length:722 AA
molecular weight: 77392,27640 Da
isoelectric point:5,59821
aromaticity:0,08864
hydropathy:-0,27784

Domains

Domains [InterPro]
DC_1514
STR
20–722
DC_1514
SSF88874
STR
255–421
SSF88874 IPR030392 Coil
IPR030392
CHP
623–719
IPR030392
ABY52816.1
1 722
Architecture
STR
STR 20-722
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABY52816.1
1 722
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9735
Central domain 74 272 200 0,4146
C-terminal 273 722 449 0,8247
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-722

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiEco32
[NCBI] 		2679905 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABY52816.1 [NCBI]
Genbank nucleotide accession
EU330206.1 [NCBI]
CDS location
range 12588 -> 14756
strand +
CDS
ATGGCTAGAGAATTAATGCCCAAATCTGGTATAATGATGCCTCATGTGGTTGTAACCAGAGATGCGGCTGTTGTTGGTGTTTCTACCGTAGATGGACAGGCAGGGGCTATTGACCTCACTGGAAAGTATCTACAGAAAACTGACGCAGCTGCTACCTACCAGACTAAAACAGAAGGCGCATCTAAAGATTTTGTGCTGGATTCAATTCAACCTATTATGTCTGGTGCTTTGTTCCGAGAAGATCCTTGGGTTGTGAACGACACACCTTTCCGCTCTACTGGAGCTAACGGAGTAGAGTCAGTGGATATGATGAAGGTCACTCCTGATAACTCAATTAAGATTGGCAGCTATGCTTCCTCGGTTCAAGGCGTAGAAATTCATTCTGCTGGTCGTCTTCAGGTTGTTGACCAGAATGACAGTGGTGTAGAAACTAAGTATCCAGTTTATTCTAAACGTTATCGTCCCGAGATTGAGGATTTACCTTTCGCTGCGATTGGCTCTTATGTTAAAGACTCCAAGGGCCGTACTATAGGTGTTAATCGTACAGGGATTAACTCTGATATCAAACAACTTACCCAGAAGGTAACTTTCACTCAACCAGTAACTGTCCCTGATGCAGTTGGTGATTATGATGCCGTCACTTTGAGGCAACTTCGTAACAGTGGTGGTGGTTCTGGCGGTCCTACGATGAGTGGTATCTCTAACTTTGGTATTGGTGATTTCCATTTACGTGACAGTCGAGCTTTCATCCCAGCTTTTGAAGTAGTGTCTGACGGACAGCTTTTGAACCGTGCGGATTATCCCGACCTGTGGGCATATGCTCAGTTGTTGTCACCTATAGAAGACTCTGAATGGGTGAGTAATGTTTATCAAAGAGGTAAGTATTCTAAGGGAAATGGCACAACTACTTTCCGTGTCCCTGACAGAAACGGTGTACAATCTGGTTCTATTCAAGGTCTTTTCGGGAGAGGTGATGCTGGTTCTTCTGGTAGCAATGGGGTTGTATCAGATTCTGGTGCACCAAATATCACATACTCATCTCCTCATACAATGGTAACACTCGCCTCTGCTTCGGGGCAGGTGGCAACTAATGGAGCAATCCAATCAATCACATCTACAGACGATGTGGCTCCAGTAGGGACTGGAGGTAAATATATATCCACAAACTTTGACGCATCGCGTTCCAGCGCTGTTTACGGTCGTTCTCTTTCTGAGGTAGTTCCTCGCAACTTTATTGGTGTTTGGACTATCCGTGCTCATGGAGGGTTTACTGCTGCTAACACTTCTTGGTCTGTTATTAATAGTGATGCTTCAGAACAACCTACAGGTACACCAATTACTGGTGGGTTGGTTTCCTCTAAATATGTAGTTGGAGGTGTTGATAAATACCGGTCCTCTATCCAGTTGCTAGGGTCTAATGAAGTTGATCTATCAACTAGAATTACCACCATAAATGATAGATATGCTATTGGGGCTGCAACTTGGGATTTTAAATTAGACGGTAAACTTCTTTTCAACAAGAGCCTGACTCCTAAGGGGACAGGGGAATCTCCGGGAAATACTTATTTAACACTAGCTAACACTTGGATGAGTGCTGCATACAGTGGATACATAGGGTTTGTTGGTGGTGGGGTTGGGGTTTCTAATGGTGGTTGGAGAAACTTTATTTCTTTAGGCTCTCTAATCTTCCCAGACTCCAGTCACCCAACTGCTGTTATTTCTCAGGTTTATGACTATGACCTTTCTACAGGAAGCCAACCTAATGGAGACATTGTCAGAAATACCTATTTCAGTGCTGAGAGCTACGATATTACCTTCGGGAACAACAGTGGGACTACTAATTACATCTTCAGTAAATCTCCAGTCTCTGACGAACGACTCAAACATAGCATTAAGGAAGAAGGGACAGCCACAGCTCTTTCTAACCTAAATAAGATGGAGTATAAAACCTTTATCTATAATTATGATGAGAAAGCAACTGTAAGGCGTGGGTTTATTGCCCAACAACTTGAAGCTATTGACCCTCAATATGTTAGGAAGTATAAAACCTTCAAAGGTACTGATACCCTAGCTTTAGATGAGAATGTGTTGCTTTTAGATGCAATTGCTGCTATTCAAGAGCTTACCAAAAAGGTTGAGGTTTTAGAAGCAAAATTGGCAGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
350b828df2fe262f8138c92557ca091a4431befabf9bd6c3739b72a03f1c5a7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Proteomic Analysis of phiEco32, a Novel Escherichia coli Phage Savalia,D., Westblade,L.F., Goel,M., Florens,L., Kemp,P., Akulenko,N., Pavlova,O., Padovan,J.C., Chait,B.T., Washburn,M.P., Ackermann,H.W., Mushegian,A., Gabisonia,T., Molineux,I. and Severinov,K. 2008 18294652 GenBank