Protein

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Genbank accession
ABY52816.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,85
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MARELMPKSGIMMPHVVVTRDAAVVGVSTVDGQAGAIDLTGKYLQKTDAAATYQTKTEGASKDFVLDSIQPIMSGALFREDPWVVNDTPFRSTGANGVESVDMMKVTPDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIEDLPFAAIGSYVKDSKGRTIGVNRTGINSDIKQLTQKVTFTQPVTVPDAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVVSDGQLLNRADYPDLWAYAQLLSPIEDSEWVSNVYQRGKYSKGNGTTTFRVPDRNGVQSGSIQGLFGRGDAGSSGSNGVVSDSGAPNITYSSPHTMVTLASASGQVATNGAIQSITSTDDVAPVGTGGKYISTNFDASRSSAVYGRSLSEVVPRNFIGVWTIRAHGGFTAANTSWSVINSDASEQPTGTPITGGLVSSKYVVGGVDKYRSSIQLLGSNEVDLSTRITTINDRYAIGAATWDFKLDGKLLFNKSLTPKGTGESPGNTYLTLANTWMSAAYSGYIGFVGGGVGVSNGGWRNFISLGSLIFPDSSHPTAVISQVYDYDLSTGSQPNGDIVRNTYFSAESYDITFGNNSGTTNYIFSKSPVSDERLKHSIKEEGTATALSNLNKMEYKTFIYNYDEKATVRRGFIAQQLEAIDPQYVRKYKTFKGTDTLALDENVLLLDAIAAIQELTKKVEVLEAKLAEK
Physico‐chemical
properties
protein length:722 AA
molecular weight: 77392,27640 Da
isoelectric point:5,59821
aromaticity:0,08864
hydropathy:-0,27784

Domains

Domains [InterPro]
SSF88874
255–421
SSF88874 IPR030392 Coil
IPR030392
623–719
IPR030392
ABY52816.1
1 722
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiEco32
[NCBI] 		2679905 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABY52816.1 [NCBI]
Genbank nucleotide accession
EU330206.1 [NCBI]
CDS location
range 12588 -> 14756
strand +
CDS
ATGGCTAGAGAATTAATGCCCAAATCTGGTATAATGATGCCTCATGTGGTTGTAACCAGAGATGCGGCTGTTGTTGGTGTTTCTACCGTAGATGGACAGGCAGGGGCTATTGACCTCACTGGAAAGTATCTACAGAAAACTGACGCAGCTGCTACCTACCAGACTAAAACAGAAGGCGCATCTAAAGATTTTGTGCTGGATTCAATTCAACCTATTATGTCTGGTGCTTTGTTCCGAGAAGATCCTTGGGTTGTGAACGACACACCTTTCCGCTCTACTGGAGCTAACGGAGTAGAGTCAGTGGATATGATGAAGGTCACTCCTGATAACTCAATTAAGATTGGCAGCTATGCTTCCTCGGTTCAAGGCGTAGAAATTCATTCTGCTGGTCGTCTTCAGGTTGTTGACCAGAATGACAGTGGTGTAGAAACTAAGTATCCAGTTTATTCTAAACGTTATCGTCCCGAGATTGAGGATTTACCTTTCGCTGCGATTGGCTCTTATGTTAAAGACTCCAAGGGCCGTACTATAGGTGTTAATCGTACAGGGATTAACTCTGATATCAAACAACTTACCCAGAAGGTAACTTTCACTCAACCAGTAACTGTCCCTGATGCAGTTGGTGATTATGATGCCGTCACTTTGAGGCAACTTCGTAACAGTGGTGGTGGTTCTGGCGGTCCTACGATGAGTGGTATCTCTAACTTTGGTATTGGTGATTTCCATTTACGTGACAGTCGAGCTTTCATCCCAGCTTTTGAAGTAGTGTCTGACGGACAGCTTTTGAACCGTGCGGATTATCCCGACCTGTGGGCATATGCTCAGTTGTTGTCACCTATAGAAGACTCTGAATGGGTGAGTAATGTTTATCAAAGAGGTAAGTATTCTAAGGGAAATGGCACAACTACTTTCCGTGTCCCTGACAGAAACGGTGTACAATCTGGTTCTATTCAAGGTCTTTTCGGGAGAGGTGATGCTGGTTCTTCTGGTAGCAATGGGGTTGTATCAGATTCTGGTGCACCAAATATCACATACTCATCTCCTCATACAATGGTAACACTCGCCTCTGCTTCGGGGCAGGTGGCAACTAATGGAGCAATCCAATCAATCACATCTACAGACGATGTGGCTCCAGTAGGGACTGGAGGTAAATATATATCCACAAACTTTGACGCATCGCGTTCCAGCGCTGTTTACGGTCGTTCTCTTTCTGAGGTAGTTCCTCGCAACTTTATTGGTGTTTGGACTATCCGTGCTCATGGAGGGTTTACTGCTGCTAACACTTCTTGGTCTGTTATTAATAGTGATGCTTCAGAACAACCTACAGGTACACCAATTACTGGTGGGTTGGTTTCCTCTAAATATGTAGTTGGAGGTGTTGATAAATACCGGTCCTCTATCCAGTTGCTAGGGTCTAATGAAGTTGATCTATCAACTAGAATTACCACCATAAATGATAGATATGCTATTGGGGCTGCAACTTGGGATTTTAAATTAGACGGTAAACTTCTTTTCAACAAGAGCCTGACTCCTAAGGGGACAGGGGAATCTCCGGGAAATACTTATTTAACACTAGCTAACACTTGGATGAGTGCTGCATACAGTGGATACATAGGGTTTGTTGGTGGTGGGGTTGGGGTTTCTAATGGTGGTTGGAGAAACTTTATTTCTTTAGGCTCTCTAATCTTCCCAGACTCCAGTCACCCAACTGCTGTTATTTCTCAGGTTTATGACTATGACCTTTCTACAGGAAGCCAACCTAATGGAGACATTGTCAGAAATACCTATTTCAGTGCTGAGAGCTACGATATTACCTTCGGGAACAACAGTGGGACTACTAATTACATCTTCAGTAAATCTCCAGTCTCTGACGAACGACTCAAACATAGCATTAAGGAAGAAGGGACAGCCACAGCTCTTTCTAACCTAAATAAGATGGAGTATAAAACCTTTATCTATAATTATGATGAGAAAGCAACTGTAAGGCGTGGGTTTATTGCCCAACAACTTGAAGCTATTGACCCTCAATATGTTAGGAAGTATAAAACCTTCAAAGGTACTGATACCCTAGCTTTAGATGAGAATGTGTTGCTTTTAGATGCAATTGCTGCTATTCAAGAGCTTACCAAAAAGGTTGAGGTTTTAGAAGCAAAATTGGCAGAGAAGTAA

Tertiary structure

PDB ID
350b828df2fe262f8138c92557ca091a4431befabf9bd6c3739b72a03f1c5a7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Proteomic Analysis of phiEco32, a Novel Escherichia coli Phage Savalia,D., Westblade,L.F., Goel,M., Florens,L., Kemp,P., Akulenko,N., Pavlova,O., Padovan,J.C., Chait,B.T., Washburn,M.P., Ackermann,H.W., Mushegian,A., Gabisonia,T., Molineux,I. and Severinov,K. — — GenBank