Protein

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Genbank accession
YP_004782196.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNAHTPFDANQDWSNPYCQNKSNDPMVDALLGNAYHVVRTVYCNLGNLKLIYDFLNQYGMVLGVQSEAELKALTTKASFARIYDKTPAGDRQVTDYLYVEGDRTGILPDDTTATGSWVKVATTGSDTGADKSNDGGYIPWIYNSGSANGGETTIRIPDETAGAPFMIVNGDWQTEGYDFEYDPVAFEIKFTTPLEQGDFVVVMRTGVPATPDNPNVSDWVTINWLYNHGAAVGGEQVIDIPFTFQAVPAVYKNGLRFHKGLTNNSYTIDSDNNRILLTEPLATNDRLIVQLGGEAKVLEITDHTIQEVARAANVKDSEVILSTDTTQVLNGKKVIYDVVTQHIYGLPTLPTNVYINAVSNGQLTYSPGNITVTLLDSYQQRNTRELWRRSLAEAGLTLVDGSFEEGATVTSKLDVVWHVAAGQCYAWGGTLPKTVGANSTPINTGGVSANAWVEYNSFTTNIPSGFYGGSCFPTENNRSLSVGDVIPSGVLFVRVSGNLMMLGSALTSSVTVTSFDQTVINGAHELYPASFFNEVITGWKIAQNDAQLSRLLPKAGNIYIGYSPVTVEGIFTIQGDIHLKPLLPKVTVDSRQFWLRSPRTWNDTNNEYDYTPYDIRIVGNFLFDFYRQDASFDPGVGLAMQSAGTLELSGCELQGAWNSNVTMDYGRWALANNLYSHDCGRGEIQQPDGSNRQGMAIIVGNATEAHIHHIRTRDTWASSVFMTSARPGRTLNVMIHDISINGSGGNGLRLQSEDLVTGVGGGNGTAITRVNISNVTIKNCESHGIRANFTNGSVTGAYIEACNAGIAIEGSSDVTYDNITIKNCSQPILCRYYPVVCTRLRFSNILITGHTDWAVFFLRKDGSSHTVNLGDIEFDGLTIHCTQSGSKAVMINCGLNATATSDITMKNVRIVGAFPDADGQAICQIHNARHIEVDNWNIRGVNGQPSSYLYAQAAQSLNVHRLVGVQPFGTVDRPIECVGIAGHVNIVNCSVPATTKGILYTSTPSSRYEEGNQFYNSAQPQQFPFTNAGQLRGGDVNTLTTTQLANIVATLINDMSLGKFIIR
Physico‐chemical
properties
protein length:1063 AA
molecular weight: 115594,91240 Da
isoelectric point:5,18897
aromaticity:0,09031
hydropathy:-0,17789

Domains

Domains [InterPro]
DC_0265
STR
1–724
DC_0265 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1688
G3DSA:3.30.2020.50
ATT
300–380
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
400–454
IPR040775
YP_004782196.1
1 1063
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-299 | ATT 300-380 | STR 381-395 | ATT 396-455 | STR 456-943 | RBD 944-1063
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004782196.1
1 1063
Domain Start End Length (AA) Confidence
N-terminal 1 539 539 0,9940
Central domain 540 1021 483 0,9881
C-terminal 1022 1063 41 0,9176
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-539
Central
540-1021
C-terminal
1022-1063

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_G7C
[NCBI] 		1054461 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus G7C
Host MDR Escherichia
[NCBI] 		561 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004782196.1 [NCBI]
Genbank nucleotide accession
NC_015933 [NCBI]
CDS location
range 63865 -> 67056
strand -
CDS
ATGAACGCACATACCCCCTTCGATGCAAATCAGGATTGGTCCAATCCTTACTGCCAGAATAAATCCAACGACCCAATGGTAGATGCACTACTCGGTAATGCTTACCATGTGGTTCGTACTGTCTACTGTAACCTGGGTAACCTAAAACTTATCTATGATTTCCTGAACCAGTATGGAATGGTTCTAGGTGTACAGTCTGAGGCAGAGCTTAAGGCGTTAACTACTAAGGCCTCCTTTGCTCGTATCTATGACAAGACTCCTGCTGGTGACCGTCAGGTTACTGACTACTTGTACGTAGAGGGTGACCGTACCGGTATCCTACCAGACGATACTACTGCAACTGGTTCGTGGGTTAAGGTAGCTACTACCGGTTCGGATACTGGTGCTGATAAATCTAACGATGGTGGCTACATCCCCTGGATTTATAATTCTGGTTCAGCTAATGGAGGTGAGACTACCATTCGTATCCCTGATGAAACGGCTGGTGCACCATTTATGATTGTTAATGGTGATTGGCAGACTGAGGGTTACGATTTTGAGTATGACCCAGTAGCTTTTGAGATTAAGTTTACTACTCCACTGGAGCAGGGTGACTTTGTTGTTGTTATGCGTACAGGTGTTCCTGCTACACCGGATAACCCTAACGTATCCGACTGGGTAACTATTAACTGGTTGTACAATCATGGTGCTGCTGTTGGTGGGGAGCAGGTAATTGATATTCCTTTCACTTTCCAGGCTGTACCTGCTGTATACAAGAATGGTTTACGTTTCCATAAAGGGTTAACTAATAACTCCTATACGATTGACTCAGACAATAACCGAATCCTTCTTACTGAACCCTTGGCTACGAATGATCGTCTTATTGTTCAGTTGGGCGGGGAAGCTAAGGTACTTGAAATAACAGACCACACTATTCAGGAAGTGGCTCGTGCAGCTAACGTAAAAGATTCTGAAGTAATCCTTAGTACGGATACTACTCAGGTACTTAATGGTAAGAAGGTAATTTATGATGTAGTTACACAACACATTTATGGGTTACCCACTCTACCTACTAATGTTTACATCAACGCTGTCTCCAATGGGCAGTTAACTTATTCCCCCGGAAATATTACTGTTACTCTGCTGGATTCCTACCAACAGCGAAATACCAGAGAACTATGGCGTCGTAGTCTTGCAGAGGCTGGCTTAACGCTTGTTGATGGTAGTTTTGAGGAGGGTGCAACAGTTACTAGCAAATTAGATGTCGTATGGCATGTTGCTGCTGGTCAGTGCTACGCCTGGGGTGGAACCTTACCAAAAACAGTGGGGGCTAACTCTACGCCGATAAATACTGGCGGAGTATCGGCAAACGCCTGGGTAGAATACAATAGTTTTACCACCAACATACCATCAGGTTTTTACGGTGGTTCGTGCTTCCCAACAGAAAATAACCGTTCGTTGTCTGTCGGTGATGTTATTCCGTCAGGAGTACTGTTTGTCAGGGTGAGTGGCAATCTGATGATGTTGGGTTCCGCGCTTACGTCATCTGTGACAGTCACCAGTTTCGACCAGACCGTCATTAACGGCGCTCACGAGCTATATCCGGCTTCGTTCTTCAACGAAGTGATCACTGGCTGGAAGATTGCGCAGAACGATGCGCAGCTTTCACGCCTACTACCAAAGGCAGGTAATATTTACATTGGCTATTCACCGGTTACAGTTGAGGGTATATTCACCATCCAGGGGGATATTCACCTCAAACCGCTATTACCGAAAGTGACGGTAGATTCACGTCAGTTCTGGCTGCGTTCACCGAGAACATGGAATGATACAAACAATGAATATGACTATACCCCTTATGACATCCGCATTGTCGGTAACTTCCTTTTTGATTTCTACCGACAGGATGCGTCATTTGACCCTGGCGTTGGGTTGGCTATGCAATCTGCTGGTACGCTTGAGCTTTCTGGGTGTGAATTGCAGGGGGCATGGAACAGTAACGTAACAATGGATTATGGAAGATGGGCGCTTGCAAACAACTTGTATTCTCACGATTGTGGGCGGGGAGAAATCCAACAGCCGGACGGCAGCAACCGTCAGGGCATGGCGATTATTGTTGGGAACGCAACAGAAGCACATATACATCATATCCGTACTAGAGACACATGGGCATCTTCTGTGTTTATGACTTCAGCACGTCCCGGTCGCACGCTTAATGTGATGATTCATGATATTAGTATTAATGGGTCCGGCGGTAACGGTTTGCGTCTTCAGTCTGAAGATTTGGTTACTGGCGTTGGTGGTGGTAATGGTACTGCAATTACTCGCGTCAACATTAGCAACGTAACAATTAAGAACTGTGAATCGCATGGCATCCGCGCAAACTTCACCAACGGAAGTGTGACCGGTGCTTACATTGAAGCATGTAATGCGGGTATTGCGATTGAGGGTTCCAGTGATGTCACGTATGACAACATCACAATCAAGAATTGTTCACAGCCAATCCTCTGTCGATATTATCCGGTAGTCTGCACACGCCTGCGATTTAGTAATATCTTAATAACAGGACACACAGATTGGGCTGTATTCTTTTTGCGTAAGGATGGCTCCTCTCACACAGTAAATCTAGGCGATATTGAATTCGACGGGCTGACAATCCACTGCACACAATCTGGTTCTAAAGCTGTTATGATTAACTGCGGGTTGAACGCAACAGCTACTTCCGATATCACTATGAAGAACGTGCGTATTGTTGGTGCATTTCCTGATGCAGACGGTCAAGCAATCTGTCAGATTCATAATGCCCGACACATTGAAGTAGACAACTGGAACATCAGAGGTGTTAACGGGCAGCCTAGTTCTTATCTGTACGCGCAGGCAGCTCAGAGCTTGAACGTGCATCGCCTGGTTGGTGTTCAACCGTTTGGTACTGTTGATCGCCCTATCGAGTGCGTTGGCATCGCTGGTCATGTAAACATCGTGAATTGTTCTGTTCCTGCGACTACTAAAGGAATCCTTTACACTTCTACGCCGTCTTCTCGGTATGAAGAGGGGAACCAGTTTTACAATAGCGCTCAGCCTCAGCAGTTCCCATTCACAAACGCCGGACAGTTGCGTGGTGGTGATGTGAACACGTTAACAACCACCCAACTGGCAAACATAGTTGCAACTCTGATAAATGATATGAGCCTCGGTAAGTTCATTATCAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b08e49223d6137012745b073f55f98beb68d12dd8de20b183bb7d3cb8bd59598
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6833
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and complete genome sequencing of vB_EcoP_G7C bacteriophage, a novel member of 'N4-like viruses' genus Kulikov,E.E., Kropinski,A.M., Golomidova,A.K. and Letarov,A.V. 2011 — GenBank