Protein

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Genbank accession
CAB4137909.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,86
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVKTTLQVRRDTGANWNTANPILAAGEIGFETDTGNFKIGNGTTKWNGAAGDGVNKLPYANSTGPTGATGATGPTGATGATGPTGATGATGAAGADGKGFDGVTSSTSIAVGTGSRAFTVASTGAYIIGTRVRVVNTGTPANYVEGVISALTVNTSITVNVDTIGGSGTFTAWTFTVAGNVGATGAAGATGAQGTAGATGATGATGATGPAGTNGTNGTNGTNGTNGVGYDGITSTTSLSISTGSKTITLNKLGALAIGTRIRAASTATPANYVEGVITGIATLAVTFLVDQINGSGTLTSWNVSVAGERGLSNAPATGYTRVPYSDLGVVVFSTSPTGPNQNFVSGLTSPGWTDPSPFRIQTGVLASGSWASGEQAVVFPTAFASGIVPIVTITPIASNLNATTTVTLKAAPTNTGFTAVARTQTGTTYTNAAPTSYWIAVQATSTSGAS
Physico‐chemical
properties
protein length:452 AA
molecular weight: 44040,90920 Da
isoelectric point:9,12326
aromaticity:0,06416
hydropathy:0,07942

Domains

Domains [InterPro]
SSF69349
7–238
SSF69349
IPR041352
8–45
IPR041352 PTHR24637
IPR008160
180–228
IPR008160
CAB4137909.1
1 452
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4137909.1 [NCBI]
Genbank nucleotide accession
LR796338 [NCBI]
CDS location
range 74547 -> 75905
strand -
CDS
ATGCCCGTAAAAACCACACTTCAAGTACGTAGAGATACTGGTGCTAACTGGAATACCGCTAACCCTATTTTGGCGGCAGGTGAGATTGGCTTTGAAACCGATACTGGTAACTTTAAAATTGGTAATGGCACCACTAAATGGAATGGTGCTGCTGGAGACGGTGTAAACAAACTTCCTTACGCAAACTCTACTGGGCCTACTGGAGCCACAGGAGCCACAGGCCCTACTGGGGCTACTGGTGCTACAGGCCCTACTGGGGCTACTGGTGCCACAGGAGCAGCAGGTGCTGACGGTAAAGGATTTGATGGAGTAACTTCATCTACTTCTATTGCTGTTGGAACTGGCTCTAGAGCATTTACTGTTGCTTCTACTGGAGCATACATAATTGGTACACGAGTTCGTGTAGTTAACACTGGTACTCCAGCAAACTATGTTGAGGGTGTAATTAGTGCTCTAACAGTTAACACTTCAATCACAGTGAACGTAGACACTATTGGTGGGTCTGGAACTTTCACTGCTTGGACTTTCACTGTCGCAGGTAACGTTGGTGCTACTGGAGCCGCAGGTGCTACAGGGGCTCAAGGTACCGCAGGTGCTACAGGTGCGACTGGTGCCACAGGTGCTACAGGTCCAGCAGGAACTAATGGAACCAATGGAACAAACGGTACTAATGGTACTAATGGTGTTGGTTACGACGGAATCACCTCGACCACCTCACTTTCAATTAGCACAGGCTCTAAAACTATCACACTAAACAAACTTGGTGCTCTTGCTATAGGTACTAGAATTCGTGCTGCAAGCACTGCTACCCCAGCAAATTATGTTGAAGGCGTTATCACAGGAATCGCTACACTAGCGGTTACTTTCTTAGTAGACCAGATTAATGGTTCTGGAACTTTAACTTCTTGGAATGTTTCTGTTGCGGGTGAAAGAGGTCTTTCAAATGCCCCAGCAACTGGGTATACCAGAGTGCCTTATTCAGACTTAGGTGTAGTTGTTTTTTCAACATCGCCAACTGGGCCAAACCAGAATTTTGTCTCTGGGCTTACAAGTCCTGGTTGGACTGACCCTAGCCCGTTCAGAATACAGACAGGCGTTCTTGCTTCTGGTTCTTGGGCAAGCGGTGAACAGGCTGTAGTATTTCCTACTGCTTTTGCTTCAGGTATCGTGCCGATAGTCACAATAACTCCTATTGCTTCTAACCTAAACGCTACAACTACAGTGACTTTAAAGGCTGCACCTACAAACACAGGGTTTACTGCTGTCGCTAGAACGCAGACAGGCACTACCTATACTAATGCTGCACCTACCTCATACTGGATTGCCGTTCAAGCCACTAGTACTTCTGGTGCTTCTTAA

Tertiary structure

PDB ID
0df2855676f9d5da89ce1df454189d1dc1685ef47effe042e186e88b12969f20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7473
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50