Protein

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Genbank accession
XCO40316.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGYFQMARNIEEIFGGVVVAPHQIPFTYTSTNGGETFLSLPFYPITGFVTINGGVQVPLDNFEINGNTLYLGRELDPSDVVFCLFDKIMSPQDASNNAIRIYKFLSVGGETEFTPDFTAYGVQSLFIDGRYKVPGEDYNYFKTSNKVVLDNALATGVWVVAEMNIKQNIPALAGNDGASQIGTLSGKTVEESLSERPTLEMLASGLGSSLIGLPQGGTLDQSLVWVTPEMYFAVGDGVADDTLALRNCFADATNKGLAVDFPANRRYLVTGPLDASEVFTINGNGSTIVYKSVPTASTTIIKMGKQKAVLSDLTVAVSQYQTSLTIPGIAGLVSAGDLLSLRSSDTRVAAPESNYKYGQHCVVKSVSGNTVTLMAPILEAFTVNACTVYRKGNLKVHDLNIDLTELPSTSYLVEGISVTGVGISIKGCNLLSSQYGSAGLVVQGCNSEISGNVISGFLNANGVSSGGRTGYGIYLDCNNTLVAENQLEGNKHQLTCASRSYVMSGLLVIRNYASSMGQSTSEAVFDLHANVLGKPTFRNNEIFAQRAAFGIRNGAVDIRENYIYSNRPTDTTPALIGLDEYPNIRSLIIADNILDCDSNIRLLSFGELQSVNNLVIKNNIGTIGSLIDQAMNLSSMKTVEILDNKLSGMAKIINANRRSAASTQTMFSLIQDLKIEGNTFDCTSDDLVTYVFNIYSHANTALANRLEIKNLTVKDNTINSTDTPIILDYVRLTGKTAFVGNNITHTVSGNTTTAPTQTSIGFYNSPIDNLVVRANNMSGRLRYTVRDTQLITSTAYVLETPKITFNVDDNNSLGATFENLWTSASIIFGDCQYKNNHPTGTYGTTLAFLNATTSPGWGASGIVDVSDNFFQPLSGSSVAIGVGFGNHKFIIRNNIMTAPIVDSSTATVAPYNNTIIS
Physico‐chemical
properties
protein length:917 AA
molecular weight: 98463,85630 Da
isoelectric point:5,03994
aromaticity:0,08288
hydropathy:0,01221

Domains

Domains [InterPro]
DC_0116
ATT
1–99
DC_0116 DC_2190 DC_1120
DC_0519
STR
86–198
DC_0519 IPR011050
IPR012334
STR
229–523
IPR012334
XCO40316.1
1 917
Architecture
ATT
STR
STR
RBD
ATT 1-99 | STR 100-198 | STR 206-620 | RBD 621-916 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40316.1
1 917
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9931
Central domain 242 906 666 0,9966
C-terminal 907 917 10 0,2057
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-906
C-terminal
907-917

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146041
[NCBI] 		3232220 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40316.1 [NCBI]
Genbank nucleotide accession
PP889490.1 [NCBI]
CDS location
range 142228 -> 144981
strand +
CDS
ATGGGGTATTTTCAAATGGCCAGAAACATAGAAGAAATCTTCGGTGGGGTGGTCGTAGCACCACACCAGATCCCGTTCACATACACTTCAACTAACGGCGGAGAAACTTTCCTTTCTCTGCCATTTTATCCCATCACCGGGTTTGTTACTATCAATGGTGGTGTGCAGGTTCCTCTTGATAATTTCGAAATAAACGGAAATACATTGTATCTTGGCCGAGAACTGGATCCAAGTGATGTTGTATTCTGTCTTTTCGATAAAATTATGTCTCCTCAGGATGCGAGCAATAATGCAATTCGTATCTACAAATTCCTTTCTGTCGGGGGAGAAACAGAATTTACTCCTGATTTCACGGCGTATGGTGTCCAATCTCTGTTTATTGATGGGCGTTACAAAGTACCTGGGGAAGATTACAACTATTTCAAAACTTCCAACAAAGTCGTTCTTGACAACGCATTGGCTACGGGAGTTTGGGTAGTAGCTGAGATGAACATAAAGCAGAATATTCCTGCTTTAGCTGGAAATGATGGCGCTTCACAGATTGGTACATTATCTGGTAAAACAGTTGAGGAATCTTTAAGTGAAAGACCAACATTGGAAATGCTGGCTTCTGGATTAGGATCAAGTTTAATCGGCCTTCCTCAAGGCGGGACTTTAGATCAGTCTCTTGTTTGGGTGACGCCAGAGATGTATTTTGCTGTTGGTGATGGCGTAGCTGACGACACTCTTGCATTGAGAAATTGTTTTGCTGACGCCACTAACAAAGGGCTGGCAGTAGACTTCCCGGCAAATCGTCGTTATTTGGTAACTGGCCCATTAGATGCTTCTGAAGTATTTACTATCAATGGTAATGGTTCTACAATAGTTTATAAAAGTGTACCCACGGCATCGACGACTATCATCAAAATGGGTAAACAAAAAGCGGTGTTGTCTGATTTGACAGTCGCAGTTTCCCAATATCAAACTTCGTTGACAATCCCTGGGATTGCTGGTTTGGTTTCAGCTGGTGATTTATTGTCTCTAAGATCCTCTGATACGAGGGTAGCAGCCCCGGAATCAAATTACAAATATGGTCAGCATTGCGTAGTCAAAAGTGTTTCTGGGAACACGGTGACATTAATGGCTCCTATATTAGAGGCATTTACTGTAAACGCATGTACTGTGTACAGAAAAGGTAATCTTAAAGTTCATGATCTCAACATAGATCTTACGGAACTCCCATCTACCTCATACCTGGTGGAAGGGATTTCAGTTACTGGCGTCGGAATTTCCATAAAAGGCTGTAATTTGCTTTCCAGCCAATATGGCTCAGCAGGTTTGGTGGTTCAAGGGTGTAATTCAGAAATAAGTGGAAACGTAATATCAGGATTCTTGAATGCCAATGGGGTTTCATCCGGTGGACGTACTGGATATGGGATATATCTGGATTGTAACAACACATTAGTCGCCGAAAATCAACTTGAAGGGAACAAACACCAGCTGACATGTGCTTCAAGAAGTTATGTTATGAGCGGGTTGTTGGTTATCCGCAACTATGCTTCATCCATGGGGCAGAGTACTTCAGAAGCCGTTTTCGATCTGCATGCTAACGTGTTGGGCAAACCTACTTTCCGTAACAACGAAATATTTGCTCAACGTGCTGCATTTGGTATCAGGAACGGTGCGGTGGATATACGTGAGAACTATATTTACAGCAACCGACCGACGGATACAACTCCGGCCCTGATCGGTCTTGATGAATATCCAAACATTCGTTCATTGATCATTGCTGATAATATTTTGGATTGTGACAGCAATATCAGATTGTTGAGTTTTGGAGAGTTACAAAGTGTCAACAACTTGGTGATAAAGAACAATATTGGTACTATTGGGAGTCTGATAGACCAAGCCATGAACCTTTCCAGTATGAAAACCGTAGAAATATTGGATAACAAGCTGTCTGGAATGGCCAAAATAATAAACGCAAACCGACGGTCAGCGGCTTCAACTCAAACAATGTTCTCTTTGATACAAGATTTAAAAATCGAAGGTAACACGTTTGATTGTACTTCTGACGATTTGGTTACTTATGTTTTCAATATCTATAGCCACGCCAACACGGCATTGGCAAACAGACTTGAAATCAAAAACCTTACCGTTAAAGACAATACGATTAATTCAACGGATACTCCCATAATTTTGGATTATGTGAGATTAACCGGAAAAACTGCTTTTGTGGGAAACAATATTACGCATACAGTTTCAGGTAATACCACAACAGCTCCAACCCAAACATCAATTGGTTTCTACAATAGTCCTATTGATAATTTGGTTGTTCGGGCAAATAATATGTCAGGAAGACTGCGTTACACGGTGCGGGATACACAACTTATCACTTCAACCGCATATGTCTTAGAAACTCCTAAGATCACGTTTAATGTGGATGATAACAATTCCCTGGGGGCGACGTTCGAAAATCTTTGGACTTCAGCTTCAATCATATTTGGGGATTGCCAGTATAAGAACAACCATCCGACAGGGACGTATGGCACCACATTGGCTTTCTTAAATGCCACAACTTCACCTGGGTGGGGGGCAAGTGGGATAGTAGATGTCTCTGACAACTTCTTCCAGCCACTTAGTGGATCATCAGTTGCGATCGGTGTTGGTTTCGGTAATCATAAGTTCATAATCAGGAATAATATTATGACGGCACCAATAGTCGATTCCAGCACCGCCACTGTCGCACCTTATAACAACACAATAATATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
be439a693baeb7c0d469f259878cb7d9acb6e1ea05d9286b0399c1779a8f329b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7648
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank