Protein

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Genbank accession
QFR58941.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALIYHYTRNEDGTFNVVRYRDNPMNFVVNNVPDGVPIRIFIDEICEDNDVTEDFDALKEDAIFYIVESAGGGVVKGVMKIFSVILKPLAKLLSPSAKGLSSNFANSQADSPNNSLTDRNNKPRPYERSYDICGTVQTVPNNLMTTYKIFNDTGRIIEYGYYDAGRGHLDIKAEDVTDGDTRVQDIDGSSVAIYAPYTSPNNTSTPQLQIGEVIDQQLYTTIESNEIDGITLRAPNDLGVTFSGETAVVTLSGTTGRITETAGGVDFTEDFSVGDIANLNAWTTNTVNIGDHYTVTSVSETVIELDVSSRLLSWSSASGNPIRGSDGENSIRPTDTLDKTLTDWVSINRSTVERIVVNIAAPNGMYKDNGSKLTMSATAEVQYQALDESGAPFGPIYTATGTITGRSSDYNGVTIYGYLPTASRVRVRARRTSDTDRGFNGTVSDEIVYANLYGQSVDTTPHYGNRTTVHSARKQTPRATEVRQPQLRMIATEMVFKYLGGGVFDTVMTPNRQAVQSLIRLARDPVVGGLDLSVANMDALLETQEEVESYFGSSDAGEFCYTFDDYKTTMQEIVTIIAEAIFCTPYRKGADILLDFERPRLGPEMVFTHRSKVKTSEKWSRTFNDPQVFDSLKFSYIDPVTNVKETISIPETGGLKTETYDSKGVRNKKQAYWLAHRRHQKNILRKVNVSFTATEEGIFARPNRPISVVKGSRMATYDGYITSVDGLTVHLSSPVQFTAGEPHSLVLKTRDGGAQSIPVIEGPDNRSVIMLSVPQEAIYTGNSALKTEFSFGSDSRHAAQMIMVSTVEPSDDRTVRITGFNYDADYYKYDGVSPFGRAFSDGFSNGFS
Physico‐chemical
properties
protein length:848 AA
molecular weight: 93374,84020 Da
isoelectric point:5,00032
aromaticity:0,09080
hydropathy:-0,36922

Domains

Domains [InterPro]
NF040662
350–828
NF040662
QFR58941.1
1 848
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella virus VSiA
[NCBI] 		2653661 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFR58941.1 [NCBI]
Genbank nucleotide accession
MN393079.1 [NCBI]
CDS location
range 19262 -> 21808
strand +
CDS
TTGGCGCTGATATACCACTACACAAGAAACGAGGATGGTACTTTTAACGTGGTTCGATACCGCGACAACCCTATGAATTTTGTAGTAAATAATGTGCCTGATGGGGTTCCTATTCGCATATTTATCGATGAAATATGCGAAGATAACGACGTAACAGAAGATTTTGATGCGTTAAAAGAAGATGCAATCTTTTATATTGTTGAGTCTGCGGGGGGTGGCGTTGTAAAAGGGGTAATGAAAATATTCAGCGTCATCCTTAAACCACTTGCAAAGCTTTTAAGCCCATCGGCAAAAGGCTTATCTTCTAATTTTGCAAACTCGCAGGCGGACTCGCCAAACAATAGCCTTACAGACCGCAACAATAAGCCACGACCATATGAGCGCAGTTATGACATATGTGGCACGGTACAAACCGTACCGAACAATCTTATGACAACGTACAAAATATTCAATGATACGGGCCGCATCATTGAATATGGGTATTATGACGCCGGGAGAGGTCATCTCGATATAAAAGCTGAAGATGTTACTGATGGGGACACGCGGGTGCAGGATATTGACGGGTCGTCCGTCGCGATATACGCCCCGTACACATCACCTAATAACACATCAACACCACAGTTACAGATAGGAGAGGTTATAGACCAGCAGTTGTACACCACTATAGAGTCCAACGAGATAGACGGCATAACGCTTAGGGCCCCAAATGATTTAGGCGTAACATTCAGTGGAGAGACGGCAGTAGTTACGTTGTCAGGAACAACAGGAAGAATAACAGAAACTGCCGGTGGTGTTGACTTCACAGAAGATTTTTCTGTAGGCGATATCGCTAACTTAAATGCCTGGACAACTAACACCGTTAATATAGGAGACCATTACACTGTAACATCGGTGTCAGAAACAGTTATTGAACTGGACGTATCATCGAGGCTACTGTCTTGGTCAAGCGCAAGCGGCAACCCTATCAGGGGGAGCGACGGTGAAAATAGTATCAGACCAACGGACACGCTAGATAAAACATTAACGGACTGGGTGTCTATAAATAGGAGTACCGTAGAGCGCATAGTGGTTAATATCGCCGCGCCAAATGGTATGTATAAAGACAATGGCAGCAAATTAACGATGTCTGCGACCGCCGAGGTGCAATATCAGGCCCTGGATGAGAGTGGAGCGCCGTTCGGGCCCATATACACCGCCACGGGAACAATAACAGGTCGTAGCTCAGATTATAATGGAGTTACGATATATGGCTATCTACCGACCGCGTCCCGTGTCCGGGTTAGAGCGCGGCGCACATCAGACACCGATAGAGGTTTTAATGGCACCGTTTCGGACGAAATTGTATACGCTAACCTGTACGGTCAGTCTGTGGACACAACCCCACACTATGGTAATAGAACAACAGTACATTCGGCGCGAAAACAAACCCCCAGGGCGACGGAAGTTAGGCAACCACAGCTACGTATGATTGCCACCGAAATGGTATTCAAATACTTGGGTGGTGGAGTTTTTGATACGGTAATGACACCAAATAGACAAGCTGTTCAGTCTCTTATTCGGCTAGCGAGGGACCCGGTAGTTGGTGGTCTTGATTTATCTGTAGCTAATATGGACGCGCTTTTAGAGACTCAAGAAGAAGTCGAGTCGTATTTCGGTTCTTCTGATGCTGGCGAGTTTTGCTACACGTTCGATGATTATAAGACCACAATGCAGGAAATAGTTACCATTATTGCCGAGGCTATATTTTGCACTCCGTATCGAAAAGGTGCGGATATACTTTTAGATTTTGAACGTCCGCGATTAGGGCCGGAGATGGTGTTTACTCACCGCAGTAAAGTAAAAACGTCTGAGAAATGGTCACGAACATTCAATGACCCCCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCCGTAACAAACGTTAAGGAGACAATATCTATCCCTGAAACAGGAGGTTTAAAGACCGAGACGTACGACTCTAAAGGGGTTCGCAATAAAAAACAAGCATACTGGCTGGCGCACAGACGGCATCAAAAAAATATCTTACGCAAAGTTAACGTATCATTCACCGCAACCGAAGAAGGTATTTTTGCACGACCAAACCGCCCGATATCTGTGGTTAAAGGCTCGCGCATGGCTACTTATGATGGCTATATAACTTCAGTAGACGGTTTAACGGTTCACTTGTCGTCGCCAGTACAGTTTACCGCAGGGGAACCACATTCGCTGGTACTGAAAACTCGCGATGGTGGCGCGCAAAGCATTCCGGTAATAGAAGGGCCTGACAATCGTTCTGTAATAATGCTTTCAGTACCGCAAGAAGCCATCTATACTGGTAACAGCGCGCTGAAGACAGAATTTTCCTTCGGCAGCGATAGCCGCCATGCGGCGCAAATGATTATGGTCAGCACCGTAGAACCGAGCGACGATAGAACCGTGCGCATCACTGGGTTCAATTACGATGCCGATTACTACAAATACGATGGCGTTTCGCCATTTGGCCGCGCATTTAGCGACGGATTCAGCAACGGTTTTAGTTAA

Tertiary structure

PDB ID
ec45c440ec8e5ab3ea33ae14d845dda84904feee133b54b4a2bee9d6ab39751c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella Infantis bacteriophage VSiA Denisenko,E., Kislichkina,A., Verevkin,V., Krasilnikova,V. and Volozhantsev,N. 2018-05-24 — GenBank