Protein

View in Explore
Genbank accession
XWX36669.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDKPDMESIDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKTLYRFVSGSSSSEWQFIQGLPSNKNAVISGTNILDISSPGVYFVMGMAGGMPSGVDSGFLDLSVDSNDNRLARLTDAETGKEYTSIKKPTGVYTDWKKEFEPIDMQKYILNDISDGSTKFNLLVYKSEGISFEEAVRNHIQKTGQTTFSFYSQNGVPGSPLPNSCRGLYLSDVTDVSNLHGIYYAIGTDGRFATGAVSSGSWSTPKTTPSYKELWTGAQSFLSTGATKNLSDDISNYSYVEVYTKHKTAEKTKGNDDSGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPVTEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:457 AA
molecular weight: 50402,68530 Da
isoelectric point:5,63640
aromaticity:0,10284
hydropathy:-0,39344

Domains

Domains [InterPro]
DC_1773
STR
7–246
DC_1773 IPR057110
DC_0448
STR
195–456
DC_0448
XWX36669.1
1 457
Architecture
STR
STR 7-457
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX36669.1
1 457
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,7667
Central domain 217 415 200 0,1076
C-terminal 416 457 41 0,9944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-415
C-terminal
416-457

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_9
[NCBI] 		2815610 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX36669.1 [NCBI]
Genbank nucleotide accession
MZ417354.1 [NCBI]
CDS location
range 99520 -> 100893
strand -
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCTCTTAGAGATATAAAAGAACCCGGTTACTATTATATTGGAGCTAGAACATTAGCAACGTTATTAGATAAGCCTGACATGGAGTCTATTGATGTTGTATTACATGTAGTACCACTTGATACTTCTAGTAAAGTAGTTCAACATTTATACACATTATCTACTAACAATAATCAAATTAAAACGTTATATAGATTTGTCTCAGGAAGCTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCAGGTACTAATATTTTAGATATATCTTCACCGGGTGTTTATTTTGTTATGGGAATGGCAGGAGGTATGCCTAGTGGTGTAGATTCAGGTTTTTTAGATTTAAGTGTAGATTCTAATGACAATAGACTAGCTAGGTTAACTGACGCTGAAACTGGTAAAGAGTACACTAGTATTAAGAAACCTACAGGAGTATACACAGACTGGAAAAAAGAATTTGAACCTATTGATATGCAGAAATATATACTAAATGATATTTCTGATGGAAGTACGAAATTTAATCTACTCGTTTATAAGTCTGAAGGAATATCATTTGAAGAGGCTGTAAGGAATCATATACAGAAAACAGGGCAAACAACCTTTAGTTTTTATTCTCAGAATGGGGTACCTGGTTCCCCATTACCAAATAGTTGTAGAGGTCTATACTTATCTGATGTTACAGATGTAAGTAACCTTCATGGTATATATTATGCTATAGGTACAGATGGTAGGTTTGCTACTGGAGCTGTTAGTAGTGGTTCTTGGTCTACACCAAAAACTACACCATCTTACAAAGAATTATGGACTGGAGCACAATCATTCTTATCTACAGGAGCCACTAAGAATCTCTCAGATGACATTAGTAATTATTCTTATGTAGAGGTTTATACTAAACATAAGACAGCAGAGAAGACTAAAGGTAATGATGATTCAGGTACAATTTGTCATAAATTCTACTTGGATGGTAGTGGCACTTACGTCTGCTCAGGAACTTTTGTTTCAGGAGATAGAACAGATACAAAACCACCCGTTACAGAATTCTATAGAGTAGGTGTGTCCTTTAAAGGTTCAACCTGGACTCTTGTAGATAGTGCAGTACAAAATAGTAAAACACAATATGTTACACGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
30c552effd14c70a994aaa7328b6f3f48cd3d7eb48d036bb0478c6f59fbcfcb4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank