Protein

View in Explore
Genbank accession
QQO87787.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MFKFCDGYDHYAEIGVKGTALQGYLEAAGYVVRNASDTTFSVVEGRRTGARALKFTVAASSSVNASLSWGFTTTASSVVFGFAMKAGLSRMRIARIENIVDIEWDTTTGKIRVGEELGVNPLILNAWYYFEIEIDKTANTVKVYANNELQLTVTPSSAPTTTYTIVWGQTGTAPNAGEQTLDDFYVIDGSGSRNNARLTPVEVTSRMPTADVSTQWDVVNASSSTPHYQIVSQLSPGGESKPYLQSNTAGATDMYRSNVTLPNNNQIFAVSVIAYARKGDLDDRKLGLVVNTEGGTPTEIQVPLTESYKYYQASFEQAPGGSDWNQNNVESLQFGIITR
Physico‐chemical
properties
protein length:339 AA
molecular weight: 36870,53800 Da
isoelectric point:4,94763
aromaticity:0,10029
hydropathy:-0,25398

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_ER19
[NCBI] 		2801563 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO87787.1 [NCBI]
Genbank nucleotide accession
MW355460 [NCBI]
CDS location
range 24151 -> 25170
strand -
CDS
ATGTTTAAATTCTGTGACGGGTACGACCACTATGCCGAAATCGGCGTGAAGGGTACGGCCCTACAAGGCTATCTGGAAGCCGCCGGGTACGTGGTGCGTAACGCCAGTGATACCACCTTTTCCGTTGTCGAGGGACGCCGGACTGGTGCGCGCGCGCTGAAATTCACCGTGGCCGCCAGTTCGTCCGTCAACGCCTCCCTGTCATGGGGATTCACCACGACGGCCTCGTCGGTCGTCTTCGGATTTGCCATGAAAGCCGGGCTGTCCCGTATGCGTATCGCGCGTATCGAGAACATCGTGGACATCGAGTGGGACACCACGACCGGGAAAATCCGCGTAGGGGAAGAGTTGGGCGTGAACCCGCTGATCCTGAACGCATGGTACTACTTCGAAATCGAGATCGATAAGACGGCCAACACCGTCAAGGTCTACGCGAATAACGAATTGCAGTTAACGGTTACGCCATCGAGTGCGCCGACCACCACGTACACAATCGTTTGGGGGCAGACGGGTACCGCACCTAATGCGGGCGAACAGACACTGGATGACTTCTACGTGATTGATGGTTCCGGTAGCCGCAACAACGCGCGCCTGACTCCGGTCGAAGTGACCAGCCGTATGCCGACGGCCGACGTTTCTACGCAGTGGGACGTTGTGAACGCCTCGTCCTCCACGCCGCACTATCAGATCGTGTCACAGCTTTCCCCGGGCGGCGAGTCGAAGCCATACCTGCAATCTAACACCGCAGGGGCCACCGATATGTACCGTTCGAACGTGACGCTGCCGAACAATAACCAGATCTTCGCCGTGTCCGTCATCGCGTACGCCCGTAAAGGCGACCTTGATGATCGTAAACTCGGGCTGGTGGTCAACACGGAAGGCGGTACGCCGACTGAAATTCAGGTACCGCTCACCGAGTCGTACAAGTATTATCAGGCATCGTTCGAGCAAGCGCCGGGCGGAAGTGACTGGAACCAGAACAACGTCGAATCTTTGCAATTCGGCATCATCACTCGATAA

Tertiary structure

PDB ID
5fbdb08aecb5a4d4d38dddc12021c8d59ba8a8a3cc8368d2f0ed4a8f9ad68115
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank