Protein

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Genbank accession
AXH71660.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,51
Protein sequence
MATVNLGSIKFKWKGTYAGGTAYTIDDVVSYNGSSYICIQASTGNLPTNATYFEQMSSAGTNGTDLTTTLTTQGDILYRDGSGLQRLGAGTSGQVLQTGGTGANPSWVDASGGATEILQHTTIDSTGVSNIIYNTDWTSNNFYKISMYLEHKFSTTNNANRVQFRMRNASGSINSNDYGMIGIYSHDTDSHSNNAVGVERDLNGRDNIHINGWGASTDEPLNWVKLDLFKPDNSNRQSLEVTYYNTDDSNPDFHAFYHFNGFSRDTSVKTGFEIYATNHNISHGRLVIIGHKYA
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32164,63170 Da
isoelectric point:5,60531
aromaticity:0,10884
hydropathy:-0,53265

Domains

Domains [InterPro]
DC_0393
STR
1–287
DC_0393
G3DSA:2.10.10.20
ATT
16–58
G3DSA:2.10.10.20
IPR003610
CBM
17–43
IPR003610
AXH71660.1
1 294
Architecture
STR
ATT
STR
STR 1-15 | ATT 16-58 | STR 59-287 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71660.1
1 294
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7149
Central domain 11 206 197 0,0054
C-terminal 207 294 87 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-206
C-terminal
207-294

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC031P
[NCBI] 		2283017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71660.1 [NCBI]
Genbank nucleotide accession
MH598800.1 [NCBI]
CDS location
range 31681 -> 32565
strand +
CDS
ATGGCTACAGTAAATCTCGGCTCAATTAAGTTCAAGTGGAAGGGGACTTATGCAGGTGGAACAGCTTATACTATAGATGATGTCGTATCGTACAATGGTTCGTCATACATTTGTATACAAGCAAGTACAGGAAACCTTCCAACCAACGCTACTTACTTTGAACAAATGTCTTCAGCAGGTACTAATGGTACTGATTTAACAACAACATTAACTACACAAGGCGATATTTTATATCGTGATGGCTCTGGTCTTCAAAGACTTGGTGCAGGAACAAGTGGTCAAGTATTACAAACTGGTGGTACTGGTGCAAATCCTAGTTGGGTTGATGCTTCTGGTGGTGCAACTGAAATTTTGCAACATACAACAATTGATTCAACTGGTGTTAGTAATATTATTTACAATACTGATTGGACTTCAAATAATTTTTATAAAATTTCTATGTATTTAGAACATAAATTTTCAACTACAAACAATGCTAACAGAGTACAATTTAGAATGAGAAATGCAAGTGGAAGCATTAATTCAAATGATTATGGTATGATAGGTATTTATAGTCATGACACAGATAGTCACTCAAATAATGCCGTTGGTGTAGAAAGAGATTTGAATGGTAGAGATAATATTCACATTAATGGTTGGGGTGCCTCTACTGATGAGCCACTTAATTGGGTTAAATTAGATTTATTTAAACCAGATAACAGCAACAGACAAAGTCTGGAAGTGACATATTACAATACTGATGATTCAAATCCAGATTTCCATGCTTTTTATCATTTTAATGGTTTTTCTAGAGATACATCAGTTAAAACTGGATTTGAAATTTATGCAACTAACCACAACATATCTCATGGAAGACTTGTTATAATTGGACATAAATACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6840eb0c36edf852dda803a042ed9e3c845ef160a178f68c519909fbb0892e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50