Protein

View in Explore
Genbank accession
BAV81289.1 [GenBank]
Protein name
tail protein Pb4
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MITNTQPAKMGIHQVVKGYRSLYFGHSIFVDRDVFGKAVWVDGVLRPTLLDTDNLYFIVDNLASGTEYNIQAAYYDQMVDAQLLGAQFGITLSDVQTVSTLVAPTIDSYDIIAEDVDVGVSPPVLNINLLGDGQDVEVQWSPANAQDWKTVYQGRFEPSISIANIPVGTVDVRVRGIVRYPSVDFIETSAWQMIGDLVLDWGYTPPSEPENLRFEVVKLAEPAERYDVKVYWDWERGSGANSREFVLWRTPKSKYDTVGWEDAEIINTGTSQSFLVVNHSYNLEYIYRVSVIAWGPEADNITYSLEETFTLDENTPIAENFSEETGIELNYAHIMGRLKDGGVWKQTFLVDAATGAVAIGIPDDNGRAPINFDPVNGIVNVDGQVISNEIVSASFVLANFTGQDNPRLYSAAKPIYEDPSQGIFLGYDDTDGKFKFDLGDDQRFIRWDGDELFISGNVKIVDPNRGDSTDLGQARVFLATVYRNGDSVPPSIPTNDTTYPPNAWTLNPQPRDEGEVTYASQGLVDQSTGELVDGENWGDPYQFSGSDGADGKDGNDGKDGNDGLNGELGPGSIIITLTNENLIPSTSAGKDADYLAQVGEPAKDGAVISYQGHLNQFVQHWIRESGSWIKFTVVVDGNQVVDGTLAAKKLQAKSITGDYISSSTKITAGSGNKVVVMDGVSATWALYAGNSYGPDAPFRVNRDGKLFATNAEIRGKITATQLIFEGGTPPWGDGSNDGAAGQVDTALADGTLYPDQDGLQIASGNYQAGVRGWAIDRNGNSEFNNTIVRGTMYATNGKFENVEITESCTIAGATYFTPVRHFRNVNKSVGTSETTIEEFEFDLGDVNNDFAILVSFDFQPTDDYSGIDNPNSAYGRIYVNNRQVHQSDLRAGYRGCCATVEGECVSWCDKTDFTGGWYYQRLLITPDNLIKGKNKVKFTMGYSGGRRYGNGARNSSRNIFLELVRDI
Physico‐chemical
properties
protein length:967 AA
molecular weight: 105910,64300 Da
isoelectric point:4,41465
aromaticity:0,10651
hydropathy:-0,34891

Domains

Domains [InterPro]
IPR057550
10–94
IPR057550 IPR057551 IPR057552 IPR057549
BAV81289.1
1 967
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VCPH
[NCBI] 		1674945 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAV81289.1 [NCBI]
Genbank nucleotide accession
AP014889 [NCBI]
CDS location
range 91304 -> 94207
strand -
CDS
ATGATTACAAACACGCAACCAGCCAAGATGGGGATTCATCAGGTAGTCAAGGGCTACCGTAGTCTCTACTTTGGCCACTCTATCTTCGTTGATAGGGACGTGTTCGGTAAAGCAGTGTGGGTTGACGGAGTCCTGAGACCCACTCTACTTGATACAGACAATCTGTATTTCATTGTAGATAACCTTGCTTCCGGCACAGAATACAACATTCAAGCAGCATACTATGACCAGATGGTGGATGCTCAGCTACTAGGTGCTCAGTTCGGTATCACATTATCGGATGTTCAAACAGTATCCACTCTAGTTGCCCCTACCATTGACAGCTACGACATTATAGCAGAAGACGTAGATGTAGGTGTTTCGCCTCCAGTGCTGAACATTAACCTTCTAGGTGATGGACAGGACGTAGAGGTACAGTGGTCTCCTGCTAATGCACAGGACTGGAAGACTGTATATCAAGGTCGATTTGAACCATCTATCTCTATCGCAAACATCCCGGTTGGTACTGTGGACGTACGAGTAAGGGGTATTGTTCGCTACCCTTCAGTTGACTTTATAGAGACGTCAGCATGGCAGATGATTGGGGACTTAGTTCTTGATTGGGGTTACACTCCACCATCTGAGCCTGAAAACTTACGCTTCGAAGTAGTTAAGTTAGCAGAGCCGGCGGAACGCTACGACGTTAAAGTTTACTGGGACTGGGAGCGCGGCTCTGGAGCTAACAGTAGAGAGTTTGTGCTATGGCGCACACCTAAATCCAAATACGACACAGTAGGTTGGGAAGATGCTGAGATCATCAACACAGGTACTAGCCAATCCTTCCTAGTAGTTAACCACTCCTACAACCTGGAGTATATTTACAGAGTATCAGTTATCGCTTGGGGACCTGAGGCTGACAACATCACGTACAGCTTAGAAGAGACCTTTACACTTGATGAGAACACTCCTATTGCGGAGAACTTCTCAGAAGAGACTGGTATTGAATTGAACTACGCACACATCATGGGTCGTCTAAAGGATGGCGGAGTCTGGAAGCAAACATTCTTAGTTGATGCTGCTACTGGTGCTGTTGCTATCGGTATCCCTGATGATAACGGTAGAGCCCCAATTAACTTTGACCCTGTAAATGGTATTGTTAACGTTGACGGGCAGGTAATCTCAAACGAGATTGTATCTGCAAGCTTCGTTCTAGCTAACTTTACTGGGCAGGACAACCCAAGACTTTATTCGGCTGCTAAGCCTATCTACGAAGACCCATCGCAAGGTATCTTCCTAGGTTACGACGACACAGACGGTAAATTCAAGTTTGACTTGGGTGACGACCAACGATTTATTCGCTGGGACGGTGACGAACTATTCATCTCCGGTAATGTTAAGATCGTAGACCCGAATCGTGGTGATTCTACAGACCTCGGACAGGCGCGAGTGTTCCTTGCAACTGTATATCGAAATGGTGACTCTGTTCCACCATCCATTCCTACGAATGACACTACTTACCCACCTAATGCTTGGACACTAAACCCACAACCACGTGATGAGGGTGAGGTTACATACGCTTCCCAAGGCCTTGTCGACCAGTCGACAGGAGAGCTTGTAGACGGGGAGAACTGGGGCGACCCATACCAATTCTCTGGTTCAGACGGAGCAGACGGTAAAGATGGTAACGACGGTAAGGATGGTAACGACGGTCTTAATGGTGAATTAGGTCCTGGTTCGATTATCATCACACTAACCAATGAGAACCTTATCCCTAGCACTAGCGCAGGTAAGGATGCTGACTATCTAGCTCAGGTTGGAGAGCCAGCAAAAGACGGTGCAGTAATCAGTTACCAAGGTCACTTAAACCAATTTGTACAACACTGGATTCGAGAATCAGGTTCTTGGATTAAGTTCACGGTTGTTGTAGATGGTAACCAAGTTGTAGATGGTACACTGGCAGCTAAGAAGCTACAGGCTAAGTCTATTACTGGTGACTACATTAGTTCATCTACTAAGATCACCGCAGGTTCCGGTAACAAGGTTGTAGTTATGGACGGTGTTAGTGCTACTTGGGCACTATACGCGGGTAACTCATACGGACCAGATGCGCCATTCAGGGTTAACAGAGATGGTAAGCTATTCGCTACCAACGCTGAGATCCGTGGTAAGATTACAGCTACTCAGCTAATCTTCGAAGGCGGAACACCACCTTGGGGTGACGGTTCCAACGACGGAGCAGCAGGACAGGTTGACACAGCTCTAGCGGATGGTACACTTTACCCTGACCAAGACGGCTTACAGATCGCTTCTGGTAACTACCAAGCAGGTGTTCGTGGTTGGGCTATCGACAGAAACGGTAACTCCGAGTTCAACAACACTATCGTACGAGGTACAATGTACGCTACTAACGGTAAGTTTGAAAACGTAGAGATTACTGAATCCTGTACGATTGCAGGAGCTACATACTTCACTCCGGTTAGACACTTCCGAAACGTAAACAAGTCTGTTGGTACTTCCGAGACCACGATCGAAGAGTTCGAATTCGATCTAGGTGATGTTAATAATGACTTCGCAATCTTGGTTAGTTTTGACTTCCAACCTACAGATGACTACAGCGGTATCGACAACCCTAACAGTGCTTACGGACGTATTTACGTTAACAACAGACAGGTTCACCAATCGGACTTACGTGCCGGTTACCGCGGATGTTGTGCTACTGTAGAGGGTGAGTGTGTATCTTGGTGTGACAAGACAGACTTCACTGGTGGTTGGTACTACCAAAGACTACTTATTACCCCTGACAACCTAATCAAGGGTAAGAACAAAGTAAAATTCACGATGGGTTACTCAGGCGGCCGTAGGTACGGTAACGGTGCACGTAACTCTTCTAGGAATATCTTCCTAGAGTTAGTAAGGGATATTTAA

Tertiary structure

PDB ID
0dcf01d5a9fb76718c3cc1101d63d4caf834209f977bc1f921c9f64083014236
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of marine phages isolated from coral reef seawater, Okinawa, Japan Ramphul,C., Suzuki,T., Dohra,H., Casareto,B.E., Yoshinaga,K. and Suzuki,Y. 2017-10 — GenBank