Protein

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Genbank accession
YP_010665259.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MGAKQPSHTTQTTEVKLPKWVEKASEDNYKFAQEVANKPYNPYTGQTVADIGQGTKDAWSMFYNSLGAGNSQRAAAEQIFNQVAGSNAPTVNAKSLTDVDLSKYMNPEIENVVNAAASDAERARVQALMGNADKAVAAGAFGGSRSAIVDAVTNAESIKDLSSLTAKLRSDAFNNAVSSATGDLNRDLAGQQSNATNWLAQMQQRLGAGQGLAGLGNDISSQRDKDVAGLSQIGLQQQQQQQKVLDDQKSRFDEAENYDLERLNILLSSLGMSPYGKSETATKTTSGGGGTDWASMGLGIFSILAGLSDRNEKTDIQKVGKDGATGLDLYAYRYKGDPKTYPKVVGPMAQDVEKKYPKAVKKVNGKRIVDMRYLTGDAA
Physico‐chemical
properties
protein length:379 AA
molecular weight: 40484,52540 Da
isoelectric point:6,66093
aromaticity:0,06332
hydropathy:-0,57625

Domains

Domains [InterPro]
IPR030392
308–361
IPR030392
YP_010665259.1
1 379
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspP_OH
[NCBI] 		2712957 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010665259.1 [NCBI]
Genbank nucleotide accession
NC_070933.1 [NCBI]
CDS location
range 24282 -> 25421
strand -
CDS
ATGGGTGCTAAACAGCCGTCACATACCACCCAAACCACGGAAGTAAAACTTCCTAAATGGGTGGAAAAGGCATCTGAGGACAACTACAAGTTCGCGCAGGAAGTTGCGAACAAGCCCTACAACCCATACACCGGCCAGACTGTGGCCGACATCGGGCAGGGCACCAAGGACGCTTGGAGTATGTTCTACAATTCGCTTGGCGCGGGAAACTCGCAGCGGGCGGCGGCAGAGCAAATATTCAATCAGGTGGCGGGTTCCAACGCCCCAACCGTCAATGCCAAGTCCCTGACGGATGTGGATTTGAGCAAATACATGAACCCTGAGATCGAGAACGTCGTCAACGCAGCCGCGAGCGACGCGGAGCGGGCGCGGGTTCAGGCTCTTATGGGTAACGCGGACAAAGCAGTGGCAGCTGGTGCTTTCGGTGGCTCGCGGTCGGCAATCGTCGACGCTGTGACGAATGCGGAGAGCATCAAGGACCTGTCTTCCTTGACGGCGAAGCTTCGTAGCGACGCGTTCAACAACGCCGTGTCCTCGGCAACGGGCGATCTGAACCGCGATCTGGCGGGCCAGCAGTCGAACGCCACTAACTGGTTGGCGCAGATGCAGCAGCGCCTCGGTGCGGGTCAAGGTCTTGCGGGCCTCGGCAACGACATCAGTTCGCAGCGCGATAAGGACGTCGCCGGTCTCAGCCAAATCGGCCTGCAACAGCAGCAACAGCAGCAGAAAGTACTTGACGATCAGAAAAGCCGGTTCGACGAGGCAGAAAACTACGACCTCGAACGCCTTAACATCTTGCTTTCGTCGCTCGGTATGTCTCCTTACGGCAAGTCTGAAACTGCCACCAAGACCACATCTGGCGGGGGCGGCACCGATTGGGCTTCGATGGGTCTGGGTATCTTCTCCATTCTGGCTGGCCTTTCGGATCGCAACGAAAAAACAGACATCCAGAAAGTCGGCAAGGATGGCGCCACCGGCCTTGATCTTTACGCCTACCGCTACAAGGGTGACCCGAAAACCTACCCGAAGGTGGTCGGCCCGATGGCTCAGGACGTTGAGAAGAAGTACCCGAAGGCCGTTAAGAAGGTCAACGGTAAGCGCATTGTCGACATGCGTTACCTCACAGGAGATGCGGCATGA

Tertiary structure

PDB ID
dbfef28764bbec457bccc3ffea1b7bbb50e4da42a1c44616aae130222d86ea90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank