Protein

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Genbank accession
XCO40320.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MGTRIINCKASYSVRNGFSLVWEGGNLENCEAINNQYGYAILGGRLLNCRGIDNTSAVVDCGSNADPENQYTLYIDNCDFPASAIQTRCFYFRGSNNIRPELVTIKNCNLAGYGNFWYLLGGYSTQPLPPMLENNTLDTNTVANPTSGIATLVGGTITINTTAVRLAVASTASSLKFVSNIKIKRLLKSSTVGGLYVDSIVNGTSFTVKSDNASDASTFYWEISL
Physico‐chemical
properties
protein length:225 AA
molecular weight: 24297,06180 Da
isoelectric point:6,25140
aromaticity:0,09778
hydropathy:-0,04222

Domains

Domains [InterPro]
DC_0496
STR
1–142
DC_0496 IPR056204
XCO40320.1
1 225
Architecture
STR
ENZ
STR 1-142 | ENZ 144-223 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40320.1
1 225
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0023
Central domain 11 199 190 0,7659
C-terminal 200 225 25 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-199
C-terminal
200-225

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146041
[NCBI] 		3232220 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40320.1 [NCBI]
Genbank nucleotide accession
PP889490.1 [NCBI]
CDS location
range 146557 -> 147234
strand +
CDS
ATGGGCACTAGGATCATCAATTGCAAAGCTTCATATTCAGTAAGGAACGGATTTAGTCTAGTTTGGGAAGGCGGTAATTTAGAAAATTGTGAAGCCATAAATAACCAATACGGTTACGCCATACTCGGTGGACGTTTATTAAATTGTCGTGGTATAGACAACACATCAGCTGTTGTTGATTGTGGTTCAAACGCAGATCCTGAAAACCAATATACTCTTTATATTGATAATTGTGATTTCCCTGCTTCTGCAATACAAACCAGATGTTTCTATTTCCGAGGTTCTAACAACATTCGGCCTGAATTGGTTACAATAAAAAATTGTAATCTCGCTGGTTATGGGAACTTCTGGTATTTGTTGGGTGGTTATTCAACACAACCTTTACCTCCGATGCTAGAGAACAACACTTTGGACACCAACACGGTTGCTAACCCAACTTCTGGGATTGCAACGTTGGTCGGGGGAACAATAACTATCAATACTACTGCCGTCAGACTGGCTGTAGCAAGTACAGCAAGCAGTCTCAAATTTGTTTCTAATATTAAGATCAAACGTTTGTTGAAATCTTCTACGGTTGGTGGTCTGTACGTTGATTCTATAGTCAATGGGACATCATTCACGGTTAAAAGCGATAATGCTTCAGATGCTTCCACGTTCTATTGGGAAATATCATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82c2f8256f8a005da42d35f322a11bcd8f6dc4138c9e10ed177c92e6f945a11e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7666
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank